shinyMNP

Explainable artificial intelligence of DNA methylation-based brain tumor diagnostics

Interactive web application: https://hovestadtlab.shinyapps.io/shinyMNP/

Installation

Get the repository: git clone https://github.com/hovestadt/shinyMNP

Requirements

R (4.1.3)

R package dependencies: randomForest (v.4.7) data.table (v.1.14.2) iterpc (v.0.4.2)

Operating systems:

macOS Monterey (12.3) GNU/Linux

(tested versions)

Usage

Open shinyMNP_analysis.R to run interactively on the demo random forest classifier, or on your own