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Update inference.py #195

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Update inference.py #195

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11 changes: 9 additions & 2 deletions inference.py
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Original file line number Diff line number Diff line change
Expand Up @@ -169,6 +169,13 @@ def main(args):
def inference_multimer_model(args):
print("running in multimer mode...")
config = model_config(args.model_name)

use_small_bfd = args.preset == 'reduced_dbs' # (args.bfd_database_path is None)
if use_small_bfd:
assert args.bfd_database_path is not None
else:
assert args.bfd_database_path is not None
assert args.uniref30_database_path is not None

predict_max_templates = 4

Expand All @@ -195,7 +202,7 @@ def inference_multimer_model(args):
uniref30_database_path=args.uniref30_database_path,
uniprot_database_path=args.uniprot_database_path,
pdb_seqres_database_path=args.pdb_seqres_database_path,
use_small_bfd=(args.bfd_database_path is None),
use_small_bfd=use_small_bfd,
no_cpus=args.cpus
)
else:
Expand All @@ -210,7 +217,7 @@ def inference_multimer_model(args):
uniref30_database_path=args.uniref30_database_path,
uniprot_database_path=args.uniprot_database_path,
pdb_seqres_database_path=args.pdb_seqres_database_path,
use_small_bfd=(args.bfd_database_path is None),
use_small_bfd=use_small_bfd,
no_cpus=args.cpus
)
else:
Expand Down