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Examples for SNOMED CT Linking #29

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Jan 5, 2024
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Examples for SNOMED CT Linking #29

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4 changes: 4 additions & 0 deletions README.md
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Expand Up @@ -21,6 +21,10 @@ We use [Poetry](https://python-poetry.org/) for building, testing and dependency

A very simple pipeline highlighting the main components of xMEN can be found in [notebooks/00_Getting_Started.ipynb](notebooks/00_Getting_Started.ipynb)

## 🎓 Examples

For more advanced use cases, check out the [examples](examples) folder.

## 📂 Data Loading

Usually, BigBIO-compatible datasets can just be loaded from the Hugging Face Hub:
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11 changes: 0 additions & 11 deletions examples/02_BRONCO.ipynb → examples/01_BRONCO_German.ipynb
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@@ -1,16 +1,5 @@
{
"cells": [
{
"cell_type": "code",
"execution_count": 1,
"id": "0271244e-11b2-44ab-82e8-cf4cdcad6b13",
"metadata": {},
"outputs": [],
"source": [
"import os\n",
"os.environ['CUDA_VISIBLE_DEVICES'] = '5'"
]
},
{
"cell_type": "markdown",
"id": "eb84db40-b21a-4fba-8174-a327a831ef76",
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148 changes: 50 additions & 98 deletions examples/03_GGPONC_NER.ipynb → examples/02_spaCy_German.ipynb
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