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@anitacaron
anitacaron committed Oct 11, 2023
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2 changes: 1 addition & 1 deletion NOTES.md
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|Ontology|Version|
| :---: | :---: |
|PCL|2023-02-27|
|CL|2023-08-24|
|CL|2023-09-21|
|UBERON|2023-09-05|

### ASCT+b Tables
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2 changes: 1 addition & 1 deletion docs/Anatomical_Systems/README.md
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ASCT+B Validation Reports for Anatomical_Systems (2023-10-06)
ASCT+B Validation Reports for Anatomical_Systems (2023-10-11)
=============================================================

Table of contents
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ASCT+B Validation Reports for Anatomical_Systems (2023-10-06)
ASCT+B Validation Reports for Anatomical_Systems (2023-10-11)
=============================================================

# ASCT+B as Graph
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2 changes: 1 addition & 1 deletion docs/Anatomical_Systems/report_images_Anatomical_Systems.tsv
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Expand Up @@ -5,8 +5,8 @@ UBERON:0001009 http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_Sy
UBERON:0001043 http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg
UBERON:0001557 http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg
UBERON:0001557 http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg
UBERON:0001558 http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg
UBERON:0001558 http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg
UBERON:0001558 http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg
UBERON:0001911 http://upload.wikimedia.org/wikipedia/commons/6/64/Illu_breast_anatomy.jpg
UBERON:0002049 http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg
UBERON:0002097 http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg
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76 changes: 38 additions & 38 deletions docs/Blood/README.md
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40 changes: 20 additions & 20 deletions docs/Blood/class_Blood_log.tsv
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row_number s slabel user_slabel o olabel user_olabel deltaIC
27 CL:0000897 CD4-positive, alpha-beta memory T cell CD4 T cell memory UBERON:0000178 Blood Blood 274980.094
28 CL:0000897 CD4-positive, alpha-beta memory T cell CD4 T cell memory UBERON:0000178 Blood Blood 274980.094
31 CL:0000897 CD4-positive, alpha-beta memory T cell CD4 T cell memory UBERON:0000178 Blood Blood 274980.094
36 CL:0000824 mature natural killer cell mature Natural killer CL:0000814 mature NK T cell NK lymphocytes 149432.938
35 CL:0000938 CD16-negative, CD56-bright natural killer cell, human CD56 bright Natural killer CL:0000814 mature NK T cell NK lymphocytes 149332.937992
15 CL:0000818 transitional stage B cell transitional B cell UBERON:0000178 Blood Blood 75.6768799
20 CL:0000840 immature conventional dendritic cell transitional Dendritic Cell (tDC) UBERON:0000178 Blood Blood 3.42574968e-10
20 CL:0000840 immature conventional dendritic cell transitional Dendritic Cell (tDC) CL:0001056 dendritic cell, human dendritic cell (DC) 3.3687130346000003e-10
33 CL:0001062 effector memory CD8-positive, alpha-beta T cell, terminally differentiated CD8 T cell effector memory CD45RA UBERON:0000178 Blood Blood 5.70366454e-12
13 CL:0000787 memory B cell memory B cell UBERON:0000178 Blood Blood inf
14 CL:0000788 naive B cell naive B cell UBERON:0000178 Blood Blood inf
21 CL:0001054 CD14-positive monocyte CD14 monocyte UBERON:0000178 Blood Blood inf
23 CL:0000775 neutrophil neutrophil UBERON:0000178 Blood Blood inf
24 CL:0000771 eosinophil eosinophil UBERON:0000178 Blood Blood inf
25 CL:0000767 basophil basophil UBERON:0000178 Blood Blood inf
26 CL:0000895 naive thymus-derived CD4-positive, alpha-beta T cell CD4 naive UBERON:0000178 Blood Blood inf
27 CL:0000897 CD4-positive, alpha-beta memory T cell CD4 T cell memory UBERON:0000178 Blood Blood inf
28 CL:0000897 CD4-positive, alpha-beta memory T cell CD4 T cell memory UBERON:0000178 Blood Blood inf
30 CL:0000900 naive thymus-derived CD8-positive, alpha-beta T cell CD8 naive UBERON:0000178 Blood Blood inf
31 CL:0000897 CD4-positive, alpha-beta memory T cell CD4 T cell memory UBERON:0000178 Blood Blood inf
32 CL:0001050 effector CD8-positive, alpha-beta T cell CD8 T cell effector memory UBERON:0000178 Blood Blood inf
34 CL:0002437 mature CD8 single-positive thymocyte mature CD8 T cell UBERON:0000178 Blood Blood inf
37 CL:0000815 regulatory T cell T regulatory UBERON:0000178 Blood Blood inf
12 CL:0000816 immature B cell immature B cell UBERON:0000178 Blood Blood
13 CL:0000787 memory B cell memory B cell UBERON:0000178 Blood Blood
14 CL:0000788 naive B cell naive B cell UBERON:0000178 Blood Blood
15 CL:0000818 transitional stage B cell transitional B cell UBERON:0000178 Blood Blood
16 CL:0002394 CD141-positive myeloid dendritic cell dendritic cell type 1 (DC1) CL:0001056 dendritic cell, human dendritic cell (DC)
16 CL:0002394 CD141-positive myeloid dendritic cell dendritic cell type 1 (DC1) UBERON:0000178 Blood Blood
17 CL:0002399 CD1c-positive myeloid dendritic cell dendritic cell type 2 (DC2) CL:0001056 dendritic cell, human dendritic cell (DC)
17 CL:0002399 CD1c-positive myeloid dendritic cell dendritic cell type 2 (DC2) UBERON:0000178 Blood Blood
18 CL:0002399 CD1c-positive myeloid dendritic cell dendritic cell type 3 (DC3) CL:0001056 dendritic cell, human dendritic cell (DC)
18 CL:0002399 CD1c-positive myeloid dendritic cell dendritic cell type 3 (DC3) UBERON:0000178 Blood Blood
19 CL:0001058 plasmacytoid dendritic cell, human Plasmacytoid Dendritic Cell (pDC) UBERON:0000178 Blood Blood
21 CL:0001054 CD14-positive monocyte CD14 monocyte UBERON:0000178 Blood Blood
20 CL:0000840 immature conventional dendritic cell transitional Dendritic Cell (tDC) CL:0001056 dendritic cell, human dendritic cell (DC)
20 CL:0000840 immature conventional dendritic cell transitional Dendritic Cell (tDC) UBERON:0000178 Blood Blood
22 CL:0002396 CD14-low, CD16-positive monocyte CD16 monocyte UBERON:0000178 Blood Blood
23 CL:0000775 neutrophil neutrophil CL:0000775 neutrophil neutrophilic granulocyte
23 CL:0000775 neutrophil neutrophil UBERON:0000178 Blood Blood
24 CL:0000771 eosinophil eosinophil UBERON:0000178 Blood Blood
25 CL:0000767 basophil basophil UBERON:0000178 Blood Blood
26 CL:0000895 naive thymus-derived CD4-positive, alpha-beta T cell CD4 naive UBERON:0000178 Blood Blood
29 CL:0001087 effector memory CD4-positive, alpha-beta T cell, terminally differentiated CD4 T cell effector memory CD45RA UBERON:0000178 Blood Blood
30 CL:0000900 naive thymus-derived CD8-positive, alpha-beta T cell CD8 naive UBERON:0000178 Blood Blood
32 CL:0001050 effector CD8-positive, alpha-beta T cell CD8 T cell effector memory UBERON:0000178 Blood Blood
34 CL:0002437 mature CD8 single-positive thymocyte mature CD8 T cell UBERON:0000178 Blood Blood
33 CL:0001062 effector memory CD8-positive, alpha-beta T cell, terminally differentiated CD8 T cell effector memory CD45RA UBERON:0000178 Blood Blood
35 CL:0000938 CD16-negative, CD56-bright natural killer cell, human CD56 bright Natural killer CL:0000814 mature NK T cell NK lymphocytes
35 CL:0000938 CD16-negative, CD56-bright natural killer cell, human CD56 bright Natural killer UBERON:0000178 Blood Blood
36 CL:0000824 mature natural killer cell mature Natural killer CL:0000814 mature NK T cell NK lymphocytes
36 CL:0000824 mature natural killer cell mature Natural killer UBERON:0000178 Blood Blood
37 CL:0000815 regulatory T cell T regulatory UBERON:0000178 Blood Blood
2 changes: 1 addition & 1 deletion docs/Blood/graph.md
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ASCT+B Validation Reports for Blood (2023-10-06)
ASCT+B Validation Reports for Blood (2023-10-11)
================================================

# ASCT+B as Graph
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