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Merge pull request #23 from icrc-jofrancisco/patient-extension
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(fix) implement PatientTranslatorExtension
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icrc-fdeniger authored Nov 19, 2024
2 parents f3358e7 + 9f3434d commit fee6e2f
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/*
* with Copyright 2024 ICRC
*
* BSD 3-Clause License
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
*
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* 3. Neither the name of the copyright holder nor the names of its
* contributors may be used to endorse or promote products derived from
* this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
* DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
* FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
* DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
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package org.openmrs.module.fhir2extension.api.impl;

import static org.apache.commons.lang3.Validate.notNull;
import javax.annotation.Nonnull;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Primary;
import org.springframework.stereotype.Component;
import java.util.Objects;
import org.hl7.fhir.r4.model.Patient;
import org.hl7.fhir.r4.model.Reference;
import org.openmrs.api.LocationService;
import org.openmrs.api.context.Context;
import org.openmrs.module.fhir2.api.translators.PatientTranslator;
import org.openmrs.module.fhir2.api.translators.impl.PatientTranslatorImpl;


@Primary
@Component
public class PatientTranslatorExtensionImpl extends PatientTranslatorImpl implements PatientTranslator {

@Autowired
LocationService locationService;

@Override
public org.openmrs.Patient toOpenmrsType(@Nonnull Patient fhirPatient) {
notNull(fhirPatient, "The Patient object should not be null");

if (Context.getUserContext().getLocation() == null) {
String l = extractLocationUuidFromPatient(fhirPatient);

Integer locationId = getLocationIdFromUuid(l);
if (locationId != null) {
Context.getUserContext().setLocationId(locationId);
}
}

return toOpenmrsType(new org.openmrs.Patient(), fhirPatient);
}

private String extractLocationUuidFromPatient(Patient patient) {
if (patient.hasIdentifier()) {
return patient.getIdentifier().stream().flatMap(identifier -> identifier.getExtension().stream())
.filter(
extension -> "http://fhir.openmrs.org/ext/patient/identifier#location".equals(extension.getUrl()))
.map(extension -> {
Reference locationReference = (Reference) extension.getValue();
if (locationReference != null && locationReference.getReference() != null) {
String reference = locationReference.getReference();
return reference.substring(reference.lastIndexOf('/') + 1);
}
return null;
}).filter(Objects::nonNull).findFirst().orElse(null);
}
return null;
}

private Integer getLocationIdFromUuid(String uuid) {
org.openmrs.Location location = locationService.getLocationByUuid(uuid);

if (location != null) {
return location.getId();
}
return null;
}
}

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