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@igvteam

igvteam

Github repository for the Integrative Genomics Viewer (IGV) team.

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  1. igv.js igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    HTML 665 231

  2. igv-webapp igv-webapp Public

    IGV Web App

    JavaScript 120 44

  3. igv igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    Java 664 390

  4. igv-reports igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    Python 354 57

  5. igv-notebook igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    JavaScript 73 13

  6. juicebox.js juicebox.js Public

    HiC contact matrix visualization

    JavaScript 19 14

Repositories

Showing 10 of 38 repositories
  • igv-genomes Public

    IGV genome configuration files and associated metadata.

    igvteam/igv-genomes’s past year of commit activity
    JavaScript 0 MIT 0 0 0 Updated Mar 13, 2025
  • juicebox.js Public

    HiC contact matrix visualization

    igvteam/juicebox.js’s past year of commit activity
    JavaScript 19 MIT 14 21 0 Updated Mar 13, 2025
  • juicebox-web Public
    igvteam/juicebox-web’s past year of commit activity
    JavaScript 3 2 3 0 Updated Mar 13, 2025
  • igv-docs Public

    Markdown-based documentation website - IGV desktop application

    igvteam/igv-docs’s past year of commit activity
    JavaScript 6 1 1 0 Updated Mar 12, 2025
  • igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    igvteam/igv’s past year of commit activity
    Java 664 MIT 390 171 1 Updated Mar 11, 2025
  • igv-webapp Public

    IGV Web App

    igvteam/igv-webapp’s past year of commit activity
    JavaScript 120 MIT 44 4 0 Updated Mar 10, 2025
  • igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    igvteam/igv.js’s past year of commit activity
    HTML 665 MIT 231 69 2 Updated Mar 9, 2025
  • spacewalk Public

    Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js and juicebox.js instances for rapid and intuitive visual comparison and interaction between 3D data and 1D genomic data.

    igvteam/spacewalk’s past year of commit activity
    JavaScript 10 MIT 1 1 0 Updated Feb 28, 2025
  • igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    igvteam/igv-notebook’s past year of commit activity
    JavaScript 73 MIT 13 4 0 Updated Feb 7, 2025
  • hic-straw Public

    Command line and web utilities for reading .hic contact matrix files

    igvteam/hic-straw’s past year of commit activity
    JavaScript 8 MIT 4 0 0 Updated Feb 3, 2025
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