bump bioimageio core to 0.6.8

ilastik · Sep 3, 2024 · b6c5234 · b6c5234
1 parent 1bfbeff
commit b6c5234
Showing 3 changed files with 7 additions and 3 deletions.
diff --git a/environment.yml b/environment.yml
@@ -50,6 +50,10 @@ dependencies:
   - mypy
   - pre_commit
 
+  - mkl <2024.1.0  # [linux] until pytorch is compatible with the current version
+
   - pip
+  - setuptools
+  - pip:
+    - -e .
 
-  - mkl <2024.1.0  # [linux] until pytorch is compatible with the current version
diff --git a/setup.py b/setup.py
@@ -28,7 +28,7 @@
     packages=find_packages(exclude=["tests"]),  # Required
     install_requires=[
         "bioimageio.spec==0.5.3.2",
-        "bioimageio.core==0.6.7",
+        "bioimageio.core==0.6.8",
         "grpcio>=1.31",
         "numpy",
         "protobuf",

diff --git a/vendor/core-bioimage-io-python b/vendor/core-bioimage-io-python
+1 −1		.github/workflows/build.yaml
+14 −1		README.md
+1 −1		bioimageio/core/VERSION
+43 −40		bioimageio/core/_resource_tests.py
+2 −2		bioimageio/core/block_meta.py
+26 −12		bioimageio/core/model_adapters/_model_adapter.py
+1 −1		bioimageio/core/model_adapters/_pytorch_model_adapter.py
+26 −24		bioimageio/core/model_adapters/_tensorflow_model_adapter.py
+1 −0		bioimageio/core/model_adapters/_torchscript_model_adapter.py
+1 −1		dev/env-py38.yaml
+1 −1		dev/env-tf.yaml
+1 −1		dev/env-wo-python.yaml
+1 −1		dev/env.yaml
+388 −117		example/model_usage.ipynb
+6 −0		example/model_usage_requirements.txt
+2 −13		tests/conftest.py
+12 −3		tests/test_bioimageio_spec_version.py
+17 −13		tests/test_proc_ops.py