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@imcf

IMCF

Imaging Core Facility, University of Basel

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  1. hrm-omero hrm-omero Public

    The HRM-OMERO connector

    Python 3

  2. auto-tx auto-tx Public

    Official GitHub mirror of the AutoTx intelligent background transfer service.

    C# 24 1

  3. pyppms pyppms Public

    📑 🕙 🐍 A Python package to communicate with Stratocore's PUMAPI.

    Python 4 1

  4. imcf-fiji-scripts imcf-fiji-scripts Public

    🔧 📝 ☕ 🔬 Scripts for Fiji provided by the Imaging Core Facility, Biozentrum, University of Basel

    Python 1 2

  5. imcf-fiji-toolbars imcf-fiji-toolbars Public

    ☕ 🔬 🔣 Fiji Action Bars provided by the IMCF.

    ImageJ Macro

  6. python-imcflibs python-imcflibs Public

    🐍 ☕ 🔩 🔧 🪛 A collection of commonly used Python helper functions.

    Python 3

Repositories

Showing 10 of 88 repositories
  • python-imcflibs Public

    🐍 ☕ 🔩 🔧 🪛 A collection of commonly used Python helper functions.

    imcf/python-imcflibs’s past year of commit activity
    Python 0 GPL-3.0 3 2 0 Updated Jul 10, 2024
  • imcf-fiji-scripts Public

    🔧 📝 ☕ 🔬 Scripts for Fiji provided by the Imaging Core Facility, Biozentrum, University of Basel

    imcf/imcf-fiji-scripts’s past year of commit activity
    Python 1 GPL-3.0 2 0 0 Updated Jul 1, 2024
  • omero-py Public Forked from ome/omero-py

    Python project containing Ice remoting code for OMERO

    imcf/omero-py’s past year of commit activity
    Python 0 GPL-2.0 31 0 0 Updated Jun 25, 2024
  • omero-documentation Public Forked from ome/omero-documentation

    Sphinx-based documentation for the Open Microscopy Environment

    imcf/omero-documentation’s past year of commit activity
    Shell 0 BSD-2-Clause 53 0 0 Updated Jun 25, 2024
  • omero-common Public Forked from ome/omero-common

    Gradle project containing common utilities for OMERO

    imcf/omero-common’s past year of commit activity
    Java 0 GPL-2.0 12 0 0 Updated Jun 25, 2024
  • openmicroscopy Public Forked from ome/openmicroscopy

    OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded …

    imcf/openmicroscopy’s past year of commit activity
    Java 0 GPL-2.0 105 0 0 Updated Jun 25, 2024
  • omero-scripts Public Forked from ome/omero-scripts

    Extracted OmeroPy/scripts directory for local modifications.

    imcf/omero-scripts’s past year of commit activity
    Python 0 32 0 0 Updated Jun 24, 2024
  • omero-prometheus-tools Public Forked from ome/omero-prometheus-tools

    Utilities for monitoring OMERO with Prometheus

    imcf/omero-prometheus-tools’s past year of commit activity
    Python 0 9 0 0 Updated Jun 20, 2024
  • Baysor Public Forked from kharchenkolab/Baysor

    Bayesian Segmentation of Spatial Transcriptomics Data

    imcf/Baysor’s past year of commit activity
    Julia 0 MIT 29 0 0 Updated Jun 18, 2024
  • imcf/vpt-plugin-cellpose2’s past year of commit activity
    Python 0 Apache-2.0 1 0 0 Updated Mar 27, 2024

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