Code

Nichepca refactor#4

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Merged

dschaub95 merged 8 commits intoimsb-uke:mainimsb-uke/nichepca:mainfrom dschaub95:nichepca-refactordschaub95/nichepca:nichepca-refactorCopy head branch name to clipboardSep 30, 2024

+249-59

Commits

Commits on Sep 27, 2024

• set radius expected dtype to float for distance graph

  dschaub95

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  1266030

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Commits on Sep 28, 2024

• generate random cell type labels

  dschaub95

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  883c4bc

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• refactor nichepca function and generalize functionality

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  b8d5b0f

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• extend nichepca tests

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Commits on Sep 29, 2024

• update readme

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• update readme

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  d86058c

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Commits on Sep 30, 2024

• fix bug when running pca before agg and add obsm_key option

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  052169e

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• test pca before agg case

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