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@inab

Spanish National Bioinformatics Institute

Alfonso Valencia | BSC, ICREA, INB Director - Salvador Capella-Gutierrez | BSC, INB CTO

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  1. trimal trimal Public

    A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

    C++ 180 42

  2. BIOLITMAP BIOLITMAP Public

    Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxford Bioinformatics.

    Python 20 3

  3. WfExS-backend WfExS-backend Public

    Workflow Execution Service Backend

    Python 17 6

  4. openVRE openVRE Public

    Open Virtual Research Environment

    JavaScript 8 2

  5. SmartRNASeqCaller SmartRNASeqCaller Public

    SmartRNASeqCaller is a post-processing pipeline to improve germline variant calling from RNA-Seq data

    Python 7 3

  6. rd-connect-cas-overlay rd-connect-cas-overlay Public archive

    Forked from UniconLabs/simple-cas4-overlay-template

    RD-Connect CAS overlay

    Shell 6 2

Repositories

Showing 10 of 194 repositories
  • trimal Public

    A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

    inab/trimal’s past year of commit activity
    C++ 180 GPL-3.0 42 32 2 Updated Dec 12, 2024
  • openEBench-nuxt-v3 Public

    OpenEBench Micro Frontends. Nuxt 3 version

    inab/openEBench-nuxt-v3’s past year of commit activity
    Vue 0 Apache-2.0 0 22 (1 issue needs help) 0 Updated Dec 11, 2024
  • dockerized_vre Public Forked from Socayna/dockerized_vre
    inab/dockerized_vre’s past year of commit activity
    JavaScript 0 1 0 0 Updated Dec 11, 2024
  • oeb-docker-compose Public

    Docker Compose Files for the OpenEBench Landscape

    inab/oeb-docker-compose’s past year of commit activity
    1 Apache-2.0 1 0 0 Updated Dec 11, 2024
  • WfExS-backend Public

    Workflow Execution Service Backend

    inab/WfExS-backend’s past year of commit activity
    Python 17 Apache-2.0 6 23 0 Updated Dec 10, 2024
  • execution-process-metrics-collector Public Forked from chamilad/process-metrics-collector

    A python script and a set of bash scripts to monitor, collect, and visualize metrics of a given Linux process or a give command line

    inab/execution-process-metrics-collector’s past year of commit activity
    Shell 0 GPL-3.0 14 0 0 Updated Dec 10, 2024
  • InSoLiTo Public Forked from SergiAguilo/InSoLiTo

    Inferring Social Life of Tools (InSoLiTo) is an OpenEBench project that provide guidance on scientific tools worth benchmarking

    inab/InSoLiTo’s past year of commit activity
    Python 2 MIT 2 25 0 Updated Dec 10, 2024
  • observatory-api Public

    Software Observatory API

    inab/observatory-api’s past year of commit activity
    Python 1 MIT 0 1 0 Updated Dec 4, 2024
  • vre-process_nextflow-executor Public

    Nexflow workflow job executor (for OpenEBench VRE installation)

    inab/vre-process_nextflow-executor’s past year of commit activity
    Python 0 Apache-2.0 1 8 0 Updated Dec 4, 2024
  • benchmarking-data-model Public

    OpenEBench Benchmarking Data Model repository

    inab/benchmarking-data-model’s past year of commit activity
    HTML 2 CC-BY-SA-4.0 7 7 0 Updated Dec 3, 2024
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