fix more links

_docs/gold-standard-examples.md

@@ -10,7 +10,7 @@ summary:  Describes gold standard examples for various dataset types and scenari
 
 ## **Overview**
 
-The page provides links to example datasets that satisfy the [IOOS Metadata Profile 1.2](ioos-metadata-profile-v1-2.html).
+The page provides links to example datasets that satisfy the [IOOS Metadata Profile 1.2](./ioos-metadata-profile-v1-2).
 
 Since the IOOS standard builds off of the [**NOAA NCEI NetCDF Templates**](https://www.nodc.noaa.gov/data/formats/netcdf/), the NCEI "Gold Standard" examples ([HTTP](https://data.nodc.noaa.gov/ncei/example/data/netcdf/), [THREDDS](https://data.nodc.noaa.gov/thredds/catalog/example/catalog.html)) provide a great starting point.
 

_docs/index.md

@@ -9,7 +9,7 @@ summary: The IOOS Metadata Profile contains dataset attribution guidelines and e
 
 ## **Current Profile Version**
 
-### [**IOOS Metadata Profile 1.2**](ioos-metadata-profile-v1-2.html)
+### [**IOOS Metadata Profile 1.2**](ioos-metadata-profile-v1-2)
 
 Looking for the latest version?  Follow the link above for details on requirements to implement the IOOS Metadata Profile for publishing data according to the latest IOOS guidelines.
 
@@ -29,7 +29,7 @@ Individual releases of the IOOS Metadata Profile (e.g. 1.0, 1.1, 1.2) target spe
 
 ## Profile Versions:
 
-### [**IOOS Metadata Profile, Version 1.2** (Current)](ioos-metadata-profile-v1-2.html)
+### [**IOOS Metadata Profile, Version 1.2** (Current)](ioos-metadata-profile-v1-2)
 
 IOOS Metadata Profile Version 1.2 (released in 2020) is the current **valid**{: style="color: green"} profile, and is based upon the following convention versions:
 
@@ -58,15 +58,15 @@ Version 1.2 of the Metadata Profile targets ERDDAP as the future platform for IO
 Data providers wishing to maintain ncSOS/IOOS SOS compatibility can refer to this list and add all required IOOS attributes from deprecated Metadata Profile 1.1 and or duplicate attributes where appropriate.
 
 
-### [**IOOS Metadata Profile, Version 1.1**](ioos-metadata-profile-v1-1.html)
+### [**IOOS Metadata Profile, Version 1.1**](ioos-metadata-profile-v1-1)
 
 IOOS Metadata Profile Version 1.1 (**deprecated in 2019**{: style="color: red"}) is based upon the following convention versions:
 
 - [Climate and Forecast Conventions (CF) 1.6](http://cfconventions.org/cf-conventions/v1.6.0/cf-conventions.html)
 - [Attribute Convention for Data Discovery 1.3](http://wiki.esipfed.org/index.php/Attribute_Convention_for_Data_Discovery_1-3)
 - [NOAA NCEI NetCDF Templates 2.0](https://www.nodc.noaa.gov/data/formats/netcdf/v2.0/)
 
-### [**IOOS Metadata Profile, Version 1.0**](ioos-metadata-profile-v1-0.html)
+### [**IOOS Metadata Profile, Version 1.0**](ioos-metadata-profile-v1-0)
 
 IOOS Metadata Profile Version 1.0 (**deprecated in 2016**{: style="color: red"}) is based upon the following convention versions:
 

_docs/ioos-metadata-profile-v1-0.md

@@ -4,7 +4,7 @@ keywords: [ioos, metadata, netCDF, 1.0]
 tags: [ioos, metadata, netCDF, 1.0]
 toc: false
 #permalink: index.html
-summary: Deprecated 2016.  Visit the [1.2 Metadata Profile](./ioos-metadata-profile-v1-2.html) page for the current version.
+summary: Deprecated 2016.  Visit the [1.2 Metadata Profile](./ioos-metadata-profile-v1-2) page for the current version.
 ---
 
 
@@ -18,7 +18,7 @@ summary: Deprecated 2016.  Visit the [1.2 Metadata Profile](./ioos-metadata-prof
  2. Each attribute in the Profile is either **required** or **recommended**.
  3. All **required** attributes must have meaningful values assigned to them in accordance with the rules prescribed by the corresponding Convention or Template.
  4. Each and all of the **recommended** attributes may be omitted; however, it is highly desirable that these attributes are included into the NetcDF metadata ***AND*** have meaningful values assigned to them.
- 5. The **`platform_variable:ioos_code`** and **`platform_variable:short_name`** are the only **interchangeable** attributes - either a single **`platform_variable:ioos_code`** or a combination of **`platform_variable:short_name`** with **`naming_authority`** is **required** to ensure that ncSOS will be able to produce the IOOS SOS Asset Identifier for the specific platform (see the [NetCDF to IOOS SOS Crosswalk](https://github.com/ioos/ioos-metadata/blob/master/docs/NetCDF-to-SOS%20Mappings_clean_2016-04-07a.xlsx) for details). The rest of attributes ***may not*** be substituted for one another.
+ 5. The **`platform_variable:ioos_code`** and **`platform_variable:short_name`** are the only **interchangeable** attributes - either a single **`platform_variable:ioos_code`** or a combination of **`platform_variable:short_name`** with **`naming_authority`** is **required** to ensure that ncSOS will be able to produce the IOOS SOS Asset Identifier for the specific platform (see the [NetCDF to IOOS SOS Crosswalk](https://github.com/ioos/ioos-metadata/raw/gh-pages/_docs/NetCDF-to-SOS%20Mappings_clean_2016-04-07a.xlsx) for details). The rest of attributes ***may not*** be substituted for one another.
  6. The **`platform_vocabulary`** attribute is at the moment the only pure ACDD v1.3 attribute that is included in the Profile.
  7. This document only describes a fraction of the Profile:
    - attributes that are IOOS-specific;
@@ -46,7 +46,7 @@ creator_url  | ACDD | The URL of the institution that collected the data. | glob
 creator_zipcode | IOOS | ZIP code of the person or organization that collected the data.  | global | recommended
 featureType | CF | CF attribute for identifying the featureType, e.g. featureType = "timeSeries". | global | required
 geophysical_variable:_FillValue<br>geospatial_variable:_FillValue | CF | This value is considered to be a special value that indicates undefined or missing data, and is returned when reading values that were not written: {::nomarkdown}<i><ul>  <li>time:_FillValue = 0.0f    <li>lat:_FillValue = 0.0f    <li>on:_FillValue = 0.0f    <li>z:_FillValue = 0.0f    <li>sea_water_temperature:_FillValue = 0.0f</ul></i>{:/} | variable | recommended
-geophysical_variable:standard_name | CF | Standardized field which uses the [CF Standard Names](http://www.cfconventions.org/documents.html/). If a variables does not have an existing standard_name in the CF-managed list, this attribute should not be used. In these cases, a standard name can be proposed to the CF community for consideration and acceptance. | variable | required
+geophysical_variable:standard_name | CF | Standardized field which uses the [CF Standard Names](https://cfconventions.org/Data/cf-standard-names/current/build/cf-standard-name-table.html/). If a variables does not have an existing standard_name in the CF-managed list, this attribute should not be used. In these cases, a standard name can be proposed to the CF community for consideration and acceptance. | variable | required
 id | ACDD | An identifier for the data set, provided by and unique within its naming authority. The combination of the **`naming authority`** and the **`id`** should be globally unique, but the **`id`** can be globally unique by itself also. IDs can be URLs, URNs, DOIs, meaningful text strings, a local key, or any other unique string of characters. The **`id`** should not include blanks. | global | required
 institution  | ACDD | The institution of the person or group that collected the data. | global | required
 instrument_variable:discriminant | IOOS | The value of a **`discriminant`** applies to the like-named field in the IOOS SOS Asset Identifier URN; it ensures that in case of multiple sensors measuring the same **`observedProperty`**, each sensor has a unique ID. <br><br>Examples: {::nomarkdown}<i><ul> <li>sea_water_temperature:<b>top</b> <li> sea_water_temperature:<b>bottom</b> <li> sea_water_temperature:<b>nortek_adp_514</b></i></ul>{:/}| variable | required, if applicable
@@ -68,7 +68,7 @@ publisher_phone | IOOS | The phone number of the person or group that distribute
 publisher_state | IOOS | State of the person or organization that distributes the data.   | global | recommended
 publisher_url  | ACDD | URL of the person or group that distributes the data files. | global | recommended
 publisher_zipcode | IOOS | ZIP code of the person or organization that distributes the data.   | global | recommended
-standard_name_vocabulary  | ACDD | Standardized field which uses the [CF Standard Names](http://www.cfconventions.org/documents.html/). If a variables does not have an existing standard_name in the CF-managed list, this attribute should not be used. In these cases, a standard name can be proposed to the CF community for consideration and acceptance. | global | required
+standard_name_vocabulary  | ACDD | Standardized field which uses the [CF Standard Names](https://cfconventions.org/Data/cf-standard-names/current/build/cf-standard-name-table.html/). If a variables does not have an existing standard_name in the CF-managed list, this attribute should not be used. In these cases, a standard name can be proposed to the CF community for consideration and acceptance. | global | required
 summary  | ACDD | One paragraph describing the data set. |  global | recommended
 title  | ACDD | One sentence about the data contained within the file. | global | required
 units  | CF | Required for most all variables that represent dimensional quantities. The value should come from [**`udunits`**](http://www.unidata.ucar.edu/software/udunits/) authoritative vocabulary, which is documented in the CF standard name table with it's corresponding standard name. The **`udunits`** package includes a file `udunits.dat` which lists its supported unit names. | variable | required

_docs/ioos-metadata-profile-v1-1.md

@@ -4,15 +4,15 @@ keywords: [ioos, metadata, netCDF, 1.1]
 tags: [ioos, metadata, netCDF, 1.1]
 toc: false
 #permalink: index.html
-summary:  Deprecated 2019.  Visit the [1.2 Metadata Profile](./ioos-metadata-profile-v1-2.html) page for the current version.
+summary:  Deprecated 2019.  Visit the [1.2 Metadata Profile](./ioos-metadata-profile-v1-2) page for the current version.
 ---
 
 ## **Revision History**
 
 
 | Version | Description | Date  |
 |:--- |:--- |:--- |
-| 1.0 | [Initial version based on the NODC Templates 1.1 and ACDD 1.1](./ioos-metadata-profile-v1-0.html) | 2016-10-01 |
+| 1.0 | [Initial version based on the NODC Templates 1.1 and ACDD 1.1](./ioos-metadata-profile-v1-0) | 2016-10-01 |
 | 1.1 | Updated version based on the NCEI Templates 2.0 and ACDD 1.3 | 2016-11-01 |
 
 
@@ -51,7 +51,7 @@ creator_url  | ACDD | The URL of the institution that collected the data. | glob
 creator_zipcode | IOOS | ZIP code of the person or organization that collected the data.  | global | recommended
 featureType | CF | CF attribute for identifying the featureType, e.g. featureType = "timeSeries". | global | required
 geophysical_variable:_FillValue<br>geospatial_variable:_FillValue | CF | This value is considered to be a special value that indicates undefined or missing data, and is returned when reading values that were not written: {::nomarkdown}<i><ul>  <li>time:_FillValue = 0.0f    <li>lat:_FillValue = 0.0f    <li>on:_FillValue = 0.0f    <li>z:_FillValue = 0.0f    <li>sea_water_temperature:_FillValue = 0.0f</ul></i>{:/} | variable | recommended
-geophysical_variable:standard_name | CF | Standardized field which uses the [CF Standard Names](http://www.cfconventions.org/documents.html/). If a variables does not have an existing standard_name in the CF-managed list, this attribute should not be used. In these cases, a standard name can be proposed to the CF community for consideration and acceptance. | variable | required
+geophysical_variable:standard_name | CF | Standardized field which uses the [CF Standard Names](https://cfconventions.org/Data/cf-standard-names/current/build/cf-standard-name-table.html). If a variables does not have an existing standard_name in the CF-managed list, this attribute should not be used. In these cases, a standard name can be proposed to the CF community for consideration and acceptance. | variable | required
 id | ACDD | An identifier for the data set, provided by and unique within its naming authority. The combination of the **`naming authority`** and the **`id`** should be globally unique, but the **`id`** can be globally unique by itself also. IDs can be URLs, URNs, DOIs, meaningful text strings, a local key, or any other unique string of characters. The **`id`** should not include blanks. | global | required
 institution  | ACDD | The institution of the person or group that collected the data. | global | required
 instrument_variable:discriminant | IOOS | The value of a **`discriminant`** applies to the like-named field in the IOOS SOS Asset Identifier URN; it ensures that in case of multiple sensors measuring the same **`observedProperty`**, each sensor has a unique ID. <br><br>Examples: {::nomarkdown}<i><ul> <li>sea_water_temperature:<b>top</b> <li> sea_water_temperature:<b>bottom</b> <li> sea_water_temperature:<b>nortek_adp_514</b></i></ul>{:/}| variable | required, if applicable
@@ -62,7 +62,7 @@ platform | ACDD | Name of the platform(s) that supported the sensor data used to
 platform_variable:ioos_code | IOOS | Provides IOOS asset identification similar to **`wmo_code`** and **`nodc_code`**. The attribute is a URN that should follow the "[IOOS Convention for Asset Identification](http://ioos.github.io/conventions-for-observing-asset-identifiers/ioos-assets-v1-0.html)" with a general pattern of _**`urn:ioos:asset_type:authority:label[:discriminant]`**_.  <br><br>Examples: {::nomarkdown}<i><ul> <li> <b><code>urn:ioos:glider:wmo:4801902:20160218T1913Z</code></b> <li><b><code>urn:ioos:station:us.glos:45024</code></b> </ul></i>{:/} <br>**NOTE:** interchangeable with **`platform_variable:short_name`** | variable | required
 platform_variable:long_name | NCEI Templates | Provide a descriptive, long name for this variable. | variable | required
 platform_variable:short_name | IOOS | Provide a short name for the platform.  Similar to ID, a **`short_name`** can be any unique string of characters that does not include blanks. <br><br>Examples: {::nomarkdown}<i><ul> <li> <b><code>station_1:short_name = “carquinez”</code></b> <li><b><code>station_1:short_name = “cb0102</code></b></i> </ul>{:/} <br>**NOTE:** interchangeable with **`platform_variable:ioos_code`** | variable | required
-platform_variable:type | IOOS | In  conjunction with a **`platform_vocabulary`** attribute, identifies platform's type as defined in the [IOOS Platform Categories vocabulary](https://mmisw.org/orr/#http://mmisw.org/ont/ioos/platform), or [SeaVoX Platform Categories vocabulary](http://vocab.nerc.ac.uk/collection/L06/current/"), or any other vocabulary. The URL of the actual vocabulary must be published in the **`platform_vocabulary`** global attribute. <br><br>Alternatively, the **`platform`** and **`platform_vocabulary`** pair of attributes may be used; however, this option is not recommended (see details in the **`platform_vocabulary`** description.) | variable | required
+platform_variable:type | IOOS | In  conjunction with a **`platform_vocabulary`** attribute, identifies platform's type as defined in the [IOOS Platform Categories vocabulary](https://mmisw.org/orr/#http://mmisw.org/ont/ioos/platform), or [SeaVoX Platform Categories vocabulary](http://vocab.nerc.ac.uk/collection/L06/current/), or any other vocabulary. The URL of the actual vocabulary must be published in the **`platform_vocabulary`** global attribute. <br><br>Alternatively, the **`platform`** and **`platform_vocabulary`** pair of attributes may be used; however, this option is not recommended (see details in the **`platform_vocabulary`** description.) | variable | required
 platform_vocabulary | ACDD | Controlled vocabulary for the names used in the "platform" attribute.<br><br> It is recommended that this attribute is used in conjunction with the **`platform_variable:type`** attribute. In that case, the recommended value for the **`platform_vocabulary`** attribute is a URL to either the [IOOS Platform Category vocabulary](https://mmisw.org/orr/#http://mmisw.org/ont/ioos/platform), or [SeaVoX Platform Categories vocabulary](http://vocab.nerc.ac.uk/collection/L06/current/). <br><br>Example:<br> **`platform_vocabulary = "https://mmisw.org/orr/#http://mmisw.org/ont/ioos/platform"`**<br><br>As an alternative (although not recommended), a NetCDF file may follow the NCEI Template v2.0, which suggests the use of "NASA GCMD Platform Keywords Version 8.1" string as the fixed value for the **`platform_vocabulary`**, and does not stipulate for the **`platform_variable:type`**. Instead, the actual type of the platform must be placed in the global **`platform`** attribute as described in the Science Keyword Rules (http://gcmd.nasa.gov/learn/rules.html) for NASA Global Change Master Directory (GCMD) Keywords (http://gcmd.nasa.gov/learn/keywords.html). <br><br>Example:<br> **`platform: In Situ Ocean-based Platforms > MOORINGS`** | global | required
 publisher_address | IOOS | Street address of the person or organization that distributes the data.   | global | recommended
 publisher_city | IOOS | City of the person or organization that distributes the data.   | global | recommended
@@ -73,7 +73,7 @@ publisher_phone | IOOS | The phone number of the person or group that distribute
 publisher_state | IOOS | State of the person or organization that distributes the data.   | global | recommended
 publisher_url  | ACDD | URL of the person or group that distributes the data files. | global | recommended
 publisher_zipcode | IOOS | ZIP code of the person or organization that distributes the data.   | global | recommended
-standard_name_vocabulary  | ACDD | Standardized field which uses the [CF Standard Names](http://www.cfconventions.org/documents.html/). If a variables does not have an existing standard_name in the CF-managed list, this attribute should not be used. In these cases, a standard name can be proposed to the CF community for consideration and acceptance. | global | required
+standard_name_vocabulary  | ACDD | Standardized field which uses the [CF Standard Names](https://cfconventions.org/Data/cf-standard-names/current/build/cf-standard-name-table.html/). If a variables does not have an existing standard_name in the CF-managed list, this attribute should not be used. In these cases, a standard name can be proposed to the CF community for consideration and acceptance. | global | required
 summary  | ACDD | One paragraph describing the data set. |  global | recommended
 title  | ACDD | One sentence about the data contained within the file. | global | required
 units  | CF | Required for most all variables that represent dimensional quantities. The value should come from [**`udunits`**](http://www.unidata.ucar.edu/software/udunits/) authoritative vocabulary, which is documented in the CF standard name table with it's corresponding standard name. The **`udunits`** package includes a file `udunits.dat` which lists its supported unit names. | variable | required