Remove MetricsReloaded scripts

.github/workflows/ci.yml

@@ -34,11 +34,7 @@ jobs:
         run: |
           python -m pip install --upgrade pip
           pip install -r dataset_conversion/requirements.txt
-          git clone https://github.com/ivadomed/MetricsReloaded.git
-          cd MetricsReloaded
-          python -m pip install .
 
       - name: Run tests with unittest
         run: |
-          python -m unittest tests/test_convert_bids_to_nnUNetV2.py
-          python -m unittest tests/test_compute_metrics_reloaded.py
+          python -m unittest tests/test_convert_bids_to_nnUNetV2.py

README.md

@@ -4,4 +4,3 @@ Repository containing utility scripts for handling various aspects in a DL model
 - Conversion to/from BIDS format to nnU-Net or other ecosystem-specific formats;
 - Quick-start guides (nnU-Net, ANIMA, MetricsReloaded)
 - Template for running inference on NifTI images (a list or dataset) or using nnUNet in `packaging/`
-- `compute_metrics/compute_metrics_reloaded.py` wrapper script to compute segmentation metrics using [MetricsReloaded](https://github.com/ivadomed/MetricsReloaded)