Data and code for mouse scRNA-seq analysis in:
For the human scRNA-seq data and code please refer to the following repository: https://github.mit.edu/AJBhutkarCompBioGroup/2021_Burger_et_al_human_scRNAseq
Raw data can be accessed with GEO: GSE164177
If there are any technical problems or questions, please submit an "Issue".
To reproduce clonotype clustering, please see "S4A" of the figures notebook.