jaimeozaez
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buisciii-tools
buisciii-tools PublicForked from BU-ISCIII/buisciii-tools
set of helper tools for bu-isciii management of its core services portfolio.
Python
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BU-ISCIII
BU-ISCIII PublicForked from BU-ISCIII/BU-ISCIII
Our Wiki and main public documentation repository.
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infectious-diseases-toolkit
infectious-diseases-toolkit PublicForked from BU-ISCIII/infectious-diseases-toolkit
Infectious diseases toolkit
Python
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relecov-tools
relecov-tools PublicForked from BU-ISCIII/relecov-tools
set of helper tools for the assembly of the different elements in the RELECOV platform (Spanish Network for genomic surveillance of SARS-Cov-2) as data download, processing, validation and upload t…
Python
355 contributions in the last year
Contribution activity
March 2025
Created 1 repository
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jaimeozaez/relecov-tools
Python
This contribution was made on Mar 6
Created a pull request in BU-ISCIII/relecov-tools that received 9 comments
New module for uploading to the SFTP the results of a batch
This PR introduces the upload_results module, which automates the process of uploading batch results to their respective COD folders. The module pe…
Opened 1 other pull request in 1 repository
BU-ISCIII/buisciii-tools
1
merged
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Some fixes and enhancements for lablog_viralrecon
This contribution was made on Mar 12
Reviewed 3 pull requests in 2 repositories
BU-ISCIII/buisciii-tools
2 pull requests
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Fixed script for prevent overwriting in loop
This contribution was made on Mar 11
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Fix
get_percentage_LDM.pyto Use Versioned CSV FileThis contribution was made on Mar 4
jaimeozaez/relecov-tools
1 pull request
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Updates made for relecov's SFTP module
This contribution was made on Mar 17
Opened 3 issues in 1 repository
BU-ISCIII/buisciii-tools
3
closed
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Lablog_viralrecon returns wrong path to the gff files when the reference does not exist in the ncbi
This contribution was made on Mar 5
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Lablog_viralrecon does not exit when refgenie environment is NOT ACTIVE
This contribution was made on Mar 5
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Modify the way lablog_viralrecon updates
/data/ucct/bi/references/refgenie/alias/references.txtThis contribution was made on Mar 4