Fix affected_start/end with a MNP #306

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Open

nh13 wants to merge 1 commit into jamescasbon:master from nh13:nh_affected_start_and_end

nh13 commented Oct 8, 2018

pyvcf does not like MNPs where the REF and ALT alleles share common bases (ex. REF=AAA and ALT=AAT).


          Fix affected_start/end with a MNP

51652ca

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet