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Extensive rewrites to workhorse function joint; some computational efficiency gained 'within' the EM algorithm.
This change also involved now allowing users to supply dispersion models for certain families.
Removed internal functions which created data matrices. These were slow, and moreover completely redundant since glmmTMB creates all required matrices in the initial condition stage.
Added bootstrapping function. The approximated SEs returned by default are known to be underestimated, so this was added as an alternative route, or merely a means of comparison.
Added xtable S3 method.
Removed bootAUC, since it was kind of problematic, and I wasn't sure how best to approach fixing it at this current time.
Sprucing up of S3 methods; plotting; print-outs etc.