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refactor: Move data location (#124)
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jannisborn authored Jul 12, 2024
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Expand Up @@ -11,7 +11,7 @@ This repo contains the code for the paper [`Accelerating Detection of Lung Patho
### Dataset
Feel free to use (and [cite](#Citation)) our dataset. We currently have >200 LUS videos labelled with a diagnostic outcome. Moreover, lung severity scores for 136 videos are made available in the [dataset_metadata.csv](./data/dataset_metadata.csv) under the column **"Lung Severity Score"** from [Gare et al., 2022](https://arxiv.org/abs/2201.07357). Further clinical information (symptoms, visible LUS patterns etc) are provided for some videos. For details see [data/README.md](data/README.md).

If you are looking for more data, please consider using the 40,000 [carefully simulated LUS images](https://gitlab.com/pulselab/covid19) and paired labels from the paper by [Zhao et al. (2024, *Communications Medicine*)](https://www.nature.com/articles/s43856-024-00463-5). In addition, segmentation labels for a subset of the in vivo data in this repo are also available. For details see [PULSE Lab Repository/README.md](PULSE%20Lab%20Repository/README.md).
If you are looking for more data, please consider using the 40,000 [carefully simulated LUS images](https://gitlab.com/pulselab/covid19) and paired labels from the paper by [Zhao et al. (2024, *Communications Medicine*)](https://www.nature.com/articles/s43856-024-00463-5). In addition, segmentation labels for a subset of the in vivo data in this repo are also available. For details see [data/pulselab/README.md](data/PulseLab/README.md).

**NOTE: Please make sure to create a meaningful train/test data split. Do not split the data on a frame-level, but on a video/patient-level. The task becomes trivial otherwise. See the instructions [here](pocovidnet/#cross-validation-splitting).**

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