-
Notifications
You must be signed in to change notification settings - Fork 7
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge pull request #254 from jembi/TB-201-update-jempi-config
TB-201 Update JeMPI Docker Images Environment Variables
- Loading branch information
Showing
24 changed files
with
857 additions
and
145 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,209 @@ | ||
|
|
||
| # JeMPI Client Registry Component - docker-swarm | ||
|
|
||
| This component consists of two services: | ||
|
|
||
| * JeMPI Web UI - http://localhost:3033 | ||
| * JeMPI API - http://localhost:50000/JeMPI | ||
|
|
||
| ## Api endpoints | ||
|
|
||
| > This service uses the openhim mapping mediator to map fhir formated patients into the JeMPI format | ||
| ### Registering a patient | ||
|
|
||
| via the api (in JeMPI format) | ||
|
|
||
| ```sh | ||
| POST - http://localhost:50000/JeMPI/cr-register | ||
|
|
||
| { | ||
| "candidateThreshold": 0.9, | ||
| "sourceId": { | ||
| "facility": "fac1", | ||
| "patient": "pat1" | ||
| }, | ||
| "uniqueInteractionData": { | ||
| "auxDateCreated": "2016-10-30T14:22:25.285", | ||
| "auxId" : "1234", | ||
| "auxClinicalData" : "SOME DATA" | ||
| }, | ||
| "demographicData": { | ||
| "givenName": "XXX", | ||
| "familyName": "YYY", | ||
| "gender": "female", | ||
| "dob": "20000101", | ||
| "phoneNumber": "123456789", | ||
| "city": "Cape Town", | ||
| "nationalId": "1234567890" | ||
| } | ||
| } | ||
| ``` | ||
|
|
||
| via the [mapping mediator](https://github.com/jembi/openhim-mediator-mapping) (in fhir format) | ||
|
|
||
| ```sh | ||
|
|
||
| POST http://localhost:3003/fhir/Patient | ||
|
|
||
| { | ||
| "resourceType": "Patient", | ||
| "gender": "male", | ||
| "birthDate": "1968-04-15", | ||
| "name": [ | ||
| { | ||
| "family": "cread", | ||
| "given": [ | ||
| "Jacess" | ||
| ] | ||
| } | ||
| ], | ||
| "address": [ | ||
| { | ||
| "city": "Indianapolis" | ||
| } | ||
| ], | ||
| "identifier": [ | ||
| { | ||
| "system": "https://instantopenhie.org/client1", | ||
| "value": "6b4573e7-f9dc-49ea-9ebb-daaa6b74a534" | ||
| }, | ||
| { | ||
| "value": "60934be6-ce88-48af-958e-02d88f77eec9", | ||
| "system": "NationalID" | ||
| } | ||
| ], | ||
| "telecom": [ | ||
| { | ||
| "value": "899-882-4991", | ||
| "system": "phone" | ||
| } | ||
| ] | ||
| } | ||
| ``` | ||
| > The identifier with the system 'NationalID' maps to the 'nationalId' property in JeMPI | ||
| ## Querying a patient by id | ||
|
|
||
| via the api (returns patient in JeMPI formated) | ||
|
|
||
| ```sh | ||
| GET - http://localhost:50000/JeMPI/expanded-golden-record/<PATIENT_GOLDEN_ID> | ||
| ``` | ||
|
|
||
| via the [mapping mediator](https://github.com/jembi/openhim-mediator-mapping) (returns patient in fhir format) | ||
|
|
||
| ```sh | ||
| GET - http://localhost:3003/fhir/Patient/<PATIENT_GOLDEN_ID> | ||
| ``` | ||
|
|
||
| ## Updating a patient | ||
|
|
||
| via the api (in JeMPI format) | ||
|
|
||
| ```sh | ||
| PATCH - http://localhost:50000/JeMPI/cr-update-fields | ||
|
|
||
| { | ||
| "goldenId": "0x5", | ||
| "fields": [ | ||
| { | ||
| "name": "givenName", | ||
| "value": "xxx" | ||
| }, | ||
| { | ||
| "name": "familyName", | ||
| "value": "yyy" | ||
| } | ||
| ] | ||
| } | ||
| ``` | ||
|
|
||
| via the [mapping mediator](https://github.com/jembi/openhim-mediator-mapping) (in fhir format) | ||
|
|
||
| ```sh | ||
| PUT - http://localhost:3003/fhir/update/Patient/<PATIENT_GOLDEN_RECORD> | ||
|
|
||
| { | ||
| "resourceType": "Patient", | ||
| "gender": "male", | ||
| "birthDate": "1968-04-15", | ||
| "name": [ | ||
| { | ||
| "family": "cread", | ||
| "given": [ | ||
| "Jacess" | ||
| ] | ||
| } | ||
| ], | ||
| "address": [ | ||
| { | ||
| "city": "Indianapolis" | ||
| } | ||
| ], | ||
| "identifier": [ | ||
| { | ||
| "system": "https://instantopenhie.org/client1", | ||
| "value": "6b4573e7-f9dc-49ea-9ebb-daaa6b74a534" | ||
| }, | ||
| { | ||
| "value": "60934be6-ce88-48af-958e-02d88f77eec9", | ||
| "system": "NationalID" | ||
| } | ||
| ], | ||
| "telecom": [ | ||
| { | ||
| "value": "899-882-4991", | ||
| "system": "phone" | ||
| } | ||
| ] | ||
| } | ||
| ``` | ||
|
|
||
| ## Query all patients deterministic | ||
|
|
||
| via the api (returns in JeMPI format) | ||
|
|
||
| ```sh | ||
| POST http://localhost:50000/JeMPI/cr-find | ||
|
|
||
| { | ||
| "operand": { | ||
| "fn": "eq", | ||
| "name": "givenName", | ||
| "value": "xxx" | ||
| }, | ||
| "operands": [ | ||
| { | ||
| "operator": "and", | ||
| "operand": { | ||
| "fn": "eq", | ||
| "name": "familyName", | ||
| "value": "yyy" | ||
| } | ||
| } | ||
| ] | ||
| } | ||
| ``` | ||
|
|
||
| via the [mapping mediator](https://github.com/jembi/openhim-mediator-mapping) (in fhir format) | ||
|
|
||
| ```sh | ||
| POST http://localhost:3003/fhir/Patients | ||
|
|
||
| { | ||
| "resourceType": "Parameters", | ||
| "parameters": [ | ||
| { | ||
| "name": "and", // matches to the operator (options are "and" and "or") | ||
| "valueCode": "familyName", // matches to the field name (options are "givenName", "familyName", "dob", "nationalId", "gender", "city" and "phoneNumber") | ||
| "valueString": "creexxxeead" // matches to value of the field | ||
| }, | ||
| { | ||
| "name": "and", | ||
| "valueCode": "city", | ||
| "valueString": "Indianapeeolis" | ||
| } | ||
| ] | ||
| } | ||
| ``` |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.