Merge pull request #11 from jmurphy6895/chore-update-CI

Chore update ci

.github/dependabot.yml

@@ -0,0 +1,10 @@
+# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
+version: 2
+updates:
+  - package-ecosystem: "github-actions"
+    directory: "/" # Location of package manifests
+    schedule:
+      interval: "weekly"
+    ignore:
+      - dependency-name: "crate-ci/typos"
+        update-types: ["version-update:semver-patch", "version-update:semver-minor"]

.github/workflows/Benchmark.yml

@@ -0,0 +1,54 @@
+name: performance tracking
+
+on:
+  pull_request:
+
+jobs:
+  performance-tracking:
+    runs-on: ubuntu-latest
+    steps:
+      # setup
+      - uses: actions/checkout@v4
+      - uses: julia-actions/setup-julia@latest
+        with:
+          version: 'nightly'
+      - uses: julia-actions/julia-buildpkg@latest
+      - name: install dependencies
+        run: julia -e 'using Pkg; pkg"add PkgBenchmark [email protected]"'
+
+      # run the benchmark suite
+      - name: run benchmarks
+        run: |
+          julia -e '
+            using BenchmarkCI
+            BenchmarkCI.judge()
+            BenchmarkCI.displayjudgement()
+            '
+
+      # generate and record the benchmark result as markdown
+      - name: generate benchmark result
+        run: |
+          body=$(julia -e '
+          using BenchmarkCI
+
+          let
+              judgement = BenchmarkCI._loadjudge(BenchmarkCI.DEFAULT_WORKSPACE)
+              title = "AstroForceModel Benchmark Result"
+              ciresult = BenchmarkCI.CIResult(; judgement, title)
+              BenchmarkCI.printcommentmd(stdout::IO, ciresult)
+          end
+          ')
+          body="${body//'%'/'%25'}"
+          body="${body//$'\n'/'%0A'}"
+          body="${body//$'\r'/'%0D'}"
+          echo $body > ./benchmark-result.artifact
+
+      # record the pull request number
+      - name: record pull request number
+        run: echo ${{ github.event.pull_request.number }} > ./pull-request-number.artifact
+
+      # save as artifacts (performance tracking (comment) workflow will use it)
+      - uses: actions/upload-artifact@v4
+        with:
+          name: perforamance-tracking
+          path: ./*.artifact

.github/workflows/BenchmarkComment.yml

@@ -0,0 +1,63 @@
+# To workaroud https://github.com/actions/first-interaction/issues/10 in a secure way,
+# we take the following steps to generate and comment a performance benchmark result:
+# 1. first "performance tracking" workflow will generate the benchmark results in an unprivileged environment triggered on `pull_request` event
+# 2. then this "performance tracking (comment)" workflow will show the result to us as a PR comment in a privileged environment
+# Note that this workflow can only be modifed by getting checked-in to the default branch
+# and thus is secure even though this workflow is granted with write permissions, etc.
+# xref: https://securitylab.github.com/research/github-actions-preventing-pwn-requests/
+
+name: performance tracking (comment)
+
+on:
+  workflow_run:
+    workflows:
+      - performance tracking
+    types:
+      - completed
+
+jobs:
+  comment:
+    runs-on: ubuntu-latest
+    if: >
+      ${{ github.event.workflow_run.event == 'pull_request' &&
+          github.event.workflow_run.conclusion == 'success' }}
+    steps:
+      - uses: actions/checkout@v4
+
+      # restore records from the artifacts
+      - uses: dawidd6/action-download-artifact@v6
+        with:
+          workflow: benchmark.yml
+          name: perforamance-tracking
+          workflow_conclusion: success
+      - name: output benchmark result
+        id: output-result-markdown
+        run: |
+          echo ::set-output name=body::$(cat ./benchmark-result.artifact)
+      - name: output pull request number
+        id: output-pull-request-number
+        run: |
+          echo ::set-output name=body::$(cat ./pull-request-number.artifact)
+
+      # check if the previous comment exists
+      - name: find comment
+        uses: peter-evans/find-comment@v3
+        id: fc
+        with:
+          issue-number: ${{ steps.output-pull-request-number.outputs.body }}
+          comment-author: 'github-actions[bot]'
+          body-includes: AstroForceModel Benchmark Result
+
+      # create/update comment
+      - name: create comment
+        if: ${{ steps.fc.outputs.comment-id == 0 }}
+        uses: peter-evans/create-or-update-comment@v4
+        with:
+          issue-number: ${{ steps.output-pull-request-number.outputs.body }}
+          body: ${{ steps.output-result-markdown.outputs.body }}
+      - name: update comment
+        if: ${{ steps.fc.outputs.comment-id != 0 }}
+        uses: peter-evans/create-or-update-comment@v4
+        with:
+          comment-id: ${{ steps.fc.outputs.comment-id }}
+          body: ${{ steps.output-result-markdown.outputs.body }}

.github/workflows/CI.yml

@@ -18,7 +18,6 @@ jobs:
       fail-fast: false
       matrix:
         version:
-          - '1.9'
           - '1.10'
           - 'nightly'
         os:

.github/workflows/Documenter.yml

@@ -11,10 +11,10 @@ jobs:
     name: Documenter
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: julia-actions/setup-julia@v1
         with:
-          version: '1.9'
+          version: '1.10'
       - uses: julia-actions/julia-buildpkg@v1
       - uses: julia-actions/julia-docdeploy@releases/v1
         env:

.github/workflows/Invalidation.yml

@@ -0,0 +1,40 @@
+name: Invalidations
+
+on:
+  pull_request:
+
+concurrency:
+  # Skip intermediate builds: always.
+  # Cancel intermediate builds: always.
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+jobs:
+  evaluate:
+    # Only run on PRs to the default branch.
+    # In the PR trigger above branches can be specified only explicitly whereas this check should work for master, main, or any other default branch
+    if: github.base_ref == github.event.repository.default_branch
+    runs-on: ubuntu-latest
+    steps:
+    - uses: julia-actions/setup-julia@v1
+      with:
+        version: '1'
+    - uses: actions/checkout@v4
+    - uses: julia-actions/julia-buildpkg@v1
+    - uses: julia-actions/julia-invalidations@v1
+      id: invs_pr
+
+    - uses: actions/checkout@v4
+      with:
+        ref: ${{ github.event.repository.default_branch }}
+    - uses: julia-actions/julia-buildpkg@v1
+    - uses: julia-actions/julia-invalidations@v1
+      id: invs_default
+
+    - name: Report invalidation counts
+      run: |
+        echo "Invalidations on default branch: ${{ steps.invs_default.outputs.total }} (${{ steps.invs_default.outputs.deps }} via deps)" >> $GITHUB_STEP_SUMMARY
+        echo "This branch: ${{ steps.invs_pr.outputs.total }} (${{ steps.invs_pr.outputs.deps }} via deps)" >> $GITHUB_STEP_SUMMARY
+    - name: Check if the PR does increase number of invalidations
+      if: steps.invs_pr.outputs.total > steps.invs_default.outputs.total
+      run: exit 1

.github/workflows/SpellCheck.yml

@@ -0,0 +1,13 @@
+name: Spell Check
+
+on: [pull_request]
+
+jobs:
+  typos-check:
+    name: Spell Check with Typos
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout Actions Repository
+        uses: actions/checkout@v4
+      - name: Check spelling
+        uses: crate-ci/[email protected] 

.gitignore

@@ -1 +1,3 @@
 /Manifest.toml
+/docs/Manifest.toml
+/.vscode/*

Project.toml

@@ -1,35 +1,38 @@
-name = "HAMMERHEAD"
+name = "AstroPropagators"
 uuid = "7f2154ff-9684-4686-a457-9182f50d0f5b"
 authors = ["Jordan Murphy"]
-version = "1.0.0-DEV"
+version = "0.1.0"
 
 [deps]
-AngleBetweenVectors = "ec570357-d46e-52ed-9726-18773498274d"
-Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
-ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
+AstroForceModels = "077569d7-e100-45f3-83e3-c646e23345bd"
+ComponentArrays = "b0b7db55-cfe3-40fc-9ded-d10e2dbeff66"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
-SatelliteToolboxAtmosphericModels = "5718ef0a-a30f-426d-bcd9-4cf31dd12909"
-SatelliteToolboxBase = "9e17983a-0463-41a7-9a16-1682db6d8b66"
-SatelliteToolboxGravityModels = "bd9e9728-6f7b-4d28-9e50-c765cb1b7c8c"
-SatelliteToolboxTransformations = "6b019ec1-7a1e-4f04-96c7-a9db1ca5514d"
-SpaceIndices = "5a540a4e-639f-452a-b107-23ea09ed4d36"
-StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
-ValSplit = "0625e100-946b-11ec-09cd-6328dd093154"
+Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
+StaticArraysCore = "1e83bf80-4336-4d27-bf5d-d5a4f845583c"
 
 [compat]
-AngleBetweenVectors = "0.3"
-ForwardDiff = "0.10"
-SatelliteToolboxAtmosphericModels = "0.1"
-SatelliteToolboxBase = "0.3"
+AstroForceModels = "0.3.3"
+Aqua = "0.8"
+ComponentArrays = "0.15"
+LinearAlgebra = "1"
+OrdinaryDiffEqAdamsBashforthMoulton = "1.1"
+OrdinaryDiffEqCore = "1.6"
+Reexport = "1.2"
 SatelliteToolboxGravityModels = "0.1"
 SatelliteToolboxTransformations = "0.1"
 SpaceIndices = "1"
-StaticArrays = "1"
-ValSplit = "0.1"
-julia = "1.9"
+StaticArraysCore = "1"
+Test = "1"
+julia = "1.10"
 
 [extras]
+Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
+OrdinaryDiffEqAdamsBashforthMoulton = "89bda076-bce5-4f1c-845f-551c83cdda9a"
+OrdinaryDiffEqCore = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
+SatelliteToolboxGravityModels = "bd9e9728-6f7b-4d28-9e50-c765cb1b7c8c"
+SatelliteToolboxTransformations = "6b019ec1-7a1e-4f04-96c7-a9db1ca5514d"
+SpaceIndices = "5a540a4e-639f-452a-b107-23ea09ed4d36"
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 
 [targets]
-test = ["Test"]
+test = ["Aqua", "OrdinaryDiffEqAdamsBashforthMoulton", "OrdinaryDiffEqCore", "SatelliteToolboxGravityModels", "SatelliteToolboxTransformations", "SpaceIndices", "Test"]

README.md

@@ -5,18 +5,21 @@
 [![](https://img.shields.io/badge/docs-stable-blue.svg)][docs-stable-url]
 [![](https://img.shields.io/badge/docs-dev-blue.svg)][docs-dev-url]
 [![Code Style: Blue](https://img.shields.io/badge/code%20style-blue-4495d1.svg)](https://github.com/invenia/BlueStyle)
+[![Aqua QA](https://raw.githubusercontent.com/JuliaTesting/Aqua.jl/master/badge.svg)](https://github.com/JuliaTesting/Aqua.jl)
 
 ## Description
 
-This project implements several propagation methods for the **HAMMERHEAD.jl** ecosystem using equations of motion for different orbital element sets. The force models can either be user-supplied or built up with the **AstroForceModels.jl** package. This package was inspired by the THALASSA library [CITE]. A full list of implemented propagators can be found below:
+This project implements several propagation methods for the **AstroPropagators.jl** ecosystem using equations of motion for different orbital element sets. The force models can either be user-supplied or built up with the **AstroForceModels.jl** package. This package was inspired by the [THALASSA library](https://github.com/woodywu-arizona/thalassa). A full list of implemented propagators can be found below:
 
-- [ ] Cowell
+- [x] Cowell
 - [ ] EDromo
 - [ ] Kustaanheimo-Stiefel
 - [ ] Stiefel-Scheifel
 - [ ] Unified State Model
 - [ ] Gauss Variational Equations
 
+NOTE: Although the code for some of these are present, only Cowell is currently supported!
+
 ## Installation
 
 ```julia
@@ -28,7 +31,5 @@ julia> Pkg.add("AstroPropagators")
 
 For more information, see the [documentation][docs-stable-url].
 
-[comment]: <>  UPDATE WITH OUR DOCS
-
 [docs-dev-url]: https://jmurphy6895.github.io/AstroPropagators.jl/stable/
 [docs-stable-url]: https://jmurphy6895.github.io/AstroPropagators.jl/stable/