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Update phyloseq_to_metagenomeSeq function #1216

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jordiestelle
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This function crashes on line 50 as follows:

data.frame(tax_table(physeq))
Error in dimnames(x) <- dn :
length of 'dimnames' [1] not equal to array extent

The proposed change is to use instead:

data.frame(tax_table(physeq)@.Data)

This function crashes on line 50 as follows:

> data.frame(tax_table(physeq))
Error in dimnames(x) <- dn : 
  length of 'dimnames' [1] not equal to array extent

The proposed change is to use instead:  
> data.frame(tax_table(physeq)@.Data)
@akiledal
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akiledal commented Nov 4, 2019

I can confirm this works, thanks!

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