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import_hitchip function added #504

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import_hitchip function added #504

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antagomir
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The import_hitchip function imports HITChip phylogenetic microarray data from a given HITChip data folder into phyloseq format. The pull request has been previously discussed with joey711 by email and I have now completed it in the hope that it will provide a useful starting point for expanding phyloseq capabilities to better cover phylogenetic microarrays.

If this pull request cannot be accepted for any reason, I will then maintain these functions in the microbiome R package instead. But I feel it would better fit the phyloseq package.

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joey711 commented Oct 3, 2015

This is an interesting pull. I will try and include it in the next release

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