StokeD

StokeD solves the Stokesian dynamics (SD) equations for N interacting particles. SD is a generalization of Brownian dynamics (BD) that includes hydrodynamic coupling interactions.

Features

• Hydrodynamic coupling interactions can be turned on or off
• Flexible interface for user-defined particle interactions
• Several interactions already available: point electrostatics and electrodynamics, screened Coulomb, van der Walls, hard-sphere collisions, gravity
• Animation module for visualizing trajectories

Installation

StokeD can be installed with pip

pip install stoked

Usage

For examples and use cases, see examples folder.

For full documentation, see docs folder.

License

StokeD is licensed under the terms of the MIT license.