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1. GoekeLab/awesome-nanopore GoekeLab/awesome-nanopore Public

   A curated list of awesome nanopore analysis tools.

   236 44

2. GoekeLab/bioinformatics-workflows GoekeLab/bioinformatics-workflows Public

   minimal example implementations for bioinformatics workflow managers

   Python 261 45

3. GoekeLab/sg-nex-data GoekeLab/sg-nex-data Public

   Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project

   Jupyter Notebook 111 25

4. GoekeLab/bambu GoekeLab/bambu Public

   Reference-guided transcript discovery and quantification for long read RNA-Seq data

   R 189 24

5. GoekeLab/m6anet GoekeLab/m6anet Public

   Detection of m6A from direct RNA-Seq data

   Python 108 19

6. GoekeLab/xpore GoekeLab/xpore Public

   Identification of differential RNA modifications from nanopore direct RNA sequencing

   Python 137 23