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Update copyright Complete the list of authors Added more authors Update headers
jose-luis-rs · Dec 23, 2024 · eac5b23 · eac5b23
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diff --git a/.github/workflows/check_metadata.yaml b/.github/workflows/check_metadata.yaml
@@ -22,6 +22,7 @@ jobs:
     steps:
       - uses: actions/checkout@v4
       - name: Try updating metadata
-        run: python meta_update.py
+        run: python update_zenodo.py
       - name: Check for Updates
-        run: git diff --exit-code
+        run: |
+          git diff --exit-code || (echo "Metadata files require updates. Please commit the changes." && exit 1)
diff --git a/.zenodo.json b/.zenodo.json
@@ -1,6 +1,13 @@
 {
-    "description": "The SOFIA module within the R3BRoot framework encapsulates the configuration and functionality of the SOFIA detectors, specifically designed for fission experiments conducted with the GLAD spectrometer. R3BRoot, built on the FairRoot framework, serves as a software environment for performing detailed Monte Carlo simulations and processing experimental data from R3B (Reactions with Relativistic Radioactive Beams) experiments. These capabilities include precise modeling of detector geometry, particle tracking, event reconstruction, and physics analysis, supporting the investigation of fission dynamics and nuclear structure in high-energy heavy-ion collision scenarios at the GSI-FAIR facility.",
+    "access_right": "open",
+    "description": "The SOFIA software module, integrated into the R3BRoot framework, provides comprehensive tools for configuring and managing the SOFIA detector analysis, specifically designed for nuclear fission experiments performed with the GLAD superconducting spectrometer. Sofia-R3BRoot, built on the FairRoot framework, offers a robust software environment for conducting detailed Monte Carlo simulations and processing experimental data from R3B (Reactions with Relativistic Radioactive Beams) experiments. Key features include precise detector geometry modeling, particle tracking, event reconstruction, and physics analysis, all of which support the study of fission dynamics and nuclear structure in high-energy heavy-ion collision scenarios at the GSI-FAIR facility. The SOFIA software package is distributed as a source release, with regular updates available for macOS and Linux.",
     "related_identifiers": [
+        {
+            "identifier": "https://github.com/FairRootGroup/FairSoft/",
+            "relation": "isDerivedFrom",
+            "resource_type": "software",
+            "scheme": "url"
+        },
         {
             "identifier": "https://github.com/FairRootGroup/FairRoot/",
             "relation": "isDerivedFrom",
@@ -9,7 +16,13 @@
         },
         {
             "identifier": "https://github.com/R3BRootGroup/R3BRoot/",
-            "relation": "isSupplementTo",
+            "relation": "isDerivedFrom",
+            "resource_type": "software",
+            "scheme": "url"
+        },
+        {
+            "identifier": "https://gitlab.com/chalmers-subexp/ucesb/",
+            "relation": "isRelatedTo",
             "resource_type": "software",
             "scheme": "url"
         },
@@ -67,15 +80,27 @@
             "affiliation": "CITENI, Industrial Campus of Ferrol, University of Coruña, 15403 Ferrol, Spain"
         },
         {
-            "name": "Alvarez Pol, Hector",
+            "name": "Chatillon, Audrey",
+            "orcid": "0000-0001-9488-5484",
+            "email": "[email protected]",
+            "affiliation": "CEA, DAM, DIF, 91297 Arpajon, France"
+        },
+        {
+            "name": "Alvarez-Pol, Hector",
             "orcid": "0000-0001-9643-6252",
             "email": "[email protected]",
             "affiliation": "IGFAE, University of Santiago de Compostela, 15782 Santiago de Compostela, Spain"
         },
         {
-            "name": "Chatillon, Audrey",
-            "orcid": "0000-0001-9488-5484",
-            "email": "[email protected]",
+            "name": "Audouin, Laurent",
+            "orcid": "0000-0001-9899-6923",
+            "email": "[email protected]",
+            "affiliation": "IPN Orsay, 91406 Orsay, France"
+        },
+        {
+            "name": "Blanchon, Guillaume",
+            "orcid": "0000-0002-3786-9143",
+            "email": "[email protected]",
             "affiliation": "CEA, DAM, DIF, 91297 Arpajon, France"
         },
         {
@@ -86,11 +111,18 @@
         {
             "name": "Graña-González, Antia",
             "orcid": "0000-0002-0842-4110",
+            "email": "[email protected]",
             "affiliation": "CITENI, Industrial Campus of Ferrol, University of Coruña, 15403 Ferrol, Spain"
         },
         {
             "name": "Morfouace, Pierre",
             "orcid": "0000-0002-2131-2199",
+            "email": "[email protected]",
+            "affiliation": "CEA, DAM, DIF, 91297 Arpajon, France"
+        },
+        {
+            "name": "Taïeb, Julien",
+            "email": "[email protected]",
             "affiliation": "CEA, DAM, DIF, 91297 Arpajon, France"
         },
         {
@@ -105,6 +137,12 @@
             "name": "Mayer, Jan",
             "affiliation": "Technical University of Berlin, 10587 Berlin, Germany"
         },
+        {
+            "type": "Other",
+            "name": "Klenze, Philipp",
+            "orcid": "0000-0001-5709-7315",
+            "affiliation": "GSI Helmholtzzentrum für Schwerionenforschung, 64291 Darmstadt, Germany"
+        },
         {
             "type": "Other",
             "name": "Wang, Yanzhao",

diff --git a/AUTHORS b/AUTHORS
@@ -1,7 +1,10 @@
 Rodríguez-Sánchez, Jose Luis [[email protected]] [https://orcid.org/0000-0002-4702-5294] [CITENI, Industrial Campus of Ferrol, University of Coruña, 15403 Ferrol, Spain]
-Alvarez Pol, Hector [[email protected]] [https://orcid.org/0000-0001-9643-6252] [IGFAE, University of Santiago de Compostela, 15782 Santiago de Compostela, Spain]
 Chatillon, Audrey [[email protected]] [https://orcid.org/0000-0001-9488-5484] [CEA, DAM, DIF, 91297 Arpajon, France]
+Alvarez-Pol, Hector [[email protected]] [https://orcid.org/0000-0001-9643-6252] [IGFAE, University of Santiago de Compostela, 15782 Santiago de Compostela, Spain]
+Audouin, Laurent [[email protected]] [https://orcid.org/0000-0001-9899-6923] [IPN Orsay, 91406 Orsay, France]
+Blanchon, Guillaume [[email protected]] [https://orcid.org/0000-0002-3786-9143] [CEA, DAM, DIF, 91297 Arpajon, France]
 García-Jiménez, Gabriel [https://orcid.org/0000-0002-4435-0163] [IGFAE, University of Santiago de Compostela, 15782 Santiago de Compostela, Spain]
-Graña-González, Antia [https://orcid.org/0000-0002-0842-4110] [CITENI, Industrial Campus of Ferrol, University of Coruña, 15403 Ferrol, Spain]
-Morfouace, Pierre [https://orcid.org/0000-0002-2131-2199] [CEA, DAM, DIF, 91297 Arpajon, France]
+Graña-González, Antia [[email protected]] [https://orcid.org/0000-0002-0842-4110] [CITENI, Industrial Campus of Ferrol, University of Coruña, 15403 Ferrol, Spain]
+Morfouace, Pierre [[email protected]] [https://orcid.org/0000-0002-2131-2199] [CEA, DAM, DIF, 91297 Arpajon, France]
+Taïeb, Julien [[email protected]] [CEA, DAM, DIF, 91297 Arpajon, France]
 Taniuchi, Ryo [https://orcid.org/0000-0002-8057-7074] [School of Physics, Engineering and Technology, University of York, YO10 5DD York, UK]
diff --git a/CONTRIBUTORS b/CONTRIBUTORS
@@ -1,2 +1,3 @@
 Mayer, Jan [Technical University of Berlin, 10587 Berlin, Germany]
+Klenze, Philipp [https://orcid.org/0000-0001-5709-7315] [GSI Helmholtzzentrum für Schwerionenforschung, 64291 Darmstadt, Germany]
 Wang, Yanzhao [https://orcid.org/0000-0002-7006-7986] [Universität zu Köln, 50923 Köln, Germany]
diff --git a/COPYRIGHT b/COPYRIGHT
@@ -4,6 +4,6 @@ Upstream-Contact: Jose Luis Rodríguez-Sánchez <[email protected]>
 Source: https://github.com/R3BRootGroup/sofia
 
 Files: *
-Copyright: 2017-2024, GSI Helmholtzzentrum fuer Schwerionenforschung GmbH
-Copyright: 2017-2024, [see AUTHORS file]
-Copyright: 2017-2024, [see CONTRIBUTORS file]
+Copyright: 2017-2025, GSI Helmholtzzentrum fuer Schwerionenforschung GmbH
+Copyright: 2017-2025, [see AUTHORS file]
+Copyright: 2017-2025, [see CONTRIBUTORS file]
diff --git a/README.md b/README.md
@@ -3,7 +3,7 @@
 [![static analysis](https://github.com/R3BRootGroup/sofia/actions/workflows/static_analysis.yml/badge.svg)](https://github.com/R3BRootGroup/sofia/actions/workflows/static_analysis.yml) [![CI-CD](https://github.com/R3BRootGroup/sofia/actions/workflows/main.yml/badge.svg)](https://github.com/R3BRootGroup/sofia/actions/workflows/main.yml)
 
 ## The SOFIA Framework
-The SOFIA module within the R3BRoot framework encapsulates the configuration and functionality of the SOFIA detectors, specifically designed for fission experiments conducted with the GLAD spectrometer. R3BRoot, built on the FairRoot framework, serves as a software environment for performing detailed Monte Carlo simulations and processing experimental data from R3B (Reactions with Relativistic Radioactive Beams) experiments. These capabilities include precise modeling of detector geometry, particle tracking, event reconstruction, and physics analysis, supporting the investigation of fission dynamics and nuclear structure in high-energy heavy-ion collision scenarios at the GSI-FAIR facility.
+The SOFIA software module within the [R3BRoot](https://github.com/R3BRootGroup/R3BRoot) framework encapsulates the configuration and functionality of the SOFIA detectors, specifically designed for fission experiments conducted with the GLAD spectrometer. Sofia-R3BRoot, built on the FairRoot framework, serves as a software environment for performing detailed Monte Carlo simulations and processing experimental data from R3B (Reactions with Relativistic Radioactive Beams) experiments. These capabilities include precise modeling of detector geometry, particle tracking, event reconstruction, and physics analysis, supporting the investigation of fission dynamics and nuclear structure in high-energy heavy-ion collision scenarios at the GSI-FAIR facility. The SOFIA software package is a source distribution with recurring releases for macOS and Linux.
 
 ## Discussion Forum
 For the software-related user support you can post a new topic on our [forum](https://forum.gsi.de/index.php?t=index&cat=40&).

diff --git a/codemeta.json b/codemeta.json
@@ -10,7 +10,7 @@
   "issueTracker": "https://github.com/R3BRootGroup/sofia/issues",
   "name": "sofia",
   "softwareVersion": "dec24",
-  "description": "Software for the SOFIA/R3B fission experiments at FAIR",
+  "description": "Software for the SOFIA/R3B fission experiments at GSI/FAIR",
   "readme": "https://github.com/R3BRootGroup/sofia/blob/dev/README.md",
   "releaseNotes": "",
   "applicationCategory": "Nuclear physics",
@@ -47,21 +47,27 @@
   "maintainer": {
     "@type": "Person",
     "givenName": "Jose Luis",
-    "familyName": "Rodriguez Sanchez",
+    "familyName": "Rodriguez-Sanchez",
     "@id": "https://orcid.org/0000-0002-4702-5294"
   },
   "author": [
     {
-      "@type": "Person",
-      "givenName": "Hector",
-      "familyName": "Alvarez Pol",
-      "@id": "https://orcid.org/0000-0001-9643-6252"
+    "@type": "Person",
+    "givenName": "Jose Luis",
+    "familyName": "Rodriguez-Sanchez",
+    "@id": "https://orcid.org/0000-0002-4702-5294"
     },
     {
       "@type": "Person",
       "givenName": "Audrey",
       "familyName": "Chatillon"
     },
+    {
+      "@type": "Person",
+      "givenName": "Hector",
+      "familyName": "Alvarez-Pol",
+      "@id": "https://orcid.org/0000-0001-9643-6252"
+    },
     {
       "@type": "Person",
       "givenName": "Gabriel",
@@ -79,12 +85,6 @@
       "givenName": "Pierre",
       "familyName": "Morfouace"
     },
-    {
-      "@type": "Person",
-      "givenName": "Jose Luis",
-      "familyName": "Rodriguez Sanchez",
-      "@id": "https://orcid.org/0000-0002-4702-5294"
-    },
     {
       "@type": "Person",
       "@id": "https://orcid.org/0000-0002-8057-7074",

diff --git a/tcal/R3BSofSciRawTofPar.cxx b/tcal/R3BSofSciRawTofPar.cxx
@@ -1,3 +1,16 @@
+/******************************************************************************
+ *   Copyright (C) 2017 GSI Helmholtzzentrum für Schwerionenforschung GmbH    *
+ *   Copyright (C) 2017-2025 Members of R3B Collaboration                     *
+ *                                                                            *
+ *             This software is distributed under the terms of the            *
+ *                 GNU Lesser General Public Licence (LGPL) version 3,        *
+ *                    copied verbatim in the file "LICENSE".                  *
+ *                                                                            *
+ * In applying this license GSI does not waive the privileges and immunities  *
+ * granted to it by virtue of its status as an Intergovernmental Organization *
+ * or submit itself to any jurisdiction.                                      *
+ ******************************************************************************/
+
 #include "R3BSofSciRawTofPar.h"
 
 #include "FairLogger.h"
@@ -127,5 +140,4 @@ void R3BSofSciRawTofPar::printParams()
         LOG(info) << "LIMIT " << param << " = " << fAllSignalsRawTofParams->GetAt(param);
     }
 }
-
-ClassImp(R3BSofSciRawTofPar);
+ClassImp(R3BSofSciRawTofPar)
diff --git a/tcal/R3BSofSciRawTofPar.h b/tcal/R3BSofSciRawTofPar.h
@@ -1,5 +1,17 @@
-#ifndef __R3BSOFSCIRAWTOFPAR_H__
-#define __R3BSOFSCIRAWTOFPAR_H__ 1
+/******************************************************************************
+ *   Copyright (C) 2017 GSI Helmholtzzentrum für Schwerionenforschung GmbH    *
+ *   Copyright (C) 2017-2025 Members of R3B Collaboration                     *
+ *                                                                            *
+ *             This software is distributed under the terms of the            *
+ *                 GNU Lesser General Public Licence (LGPL) version 3,        *
+ *                    copied verbatim in the file "LICENSE".                  *
+ *                                                                            *
+ * In applying this license GSI does not waive the privileges and immunities  *
+ * granted to it by virtue of its status as an Intergovernmental Organization *
+ * or submit itself to any jurisdiction.                                      *
+ ******************************************************************************/
+
+#pragma once
 
 #include "FairParGenericSet.h" // for FairParGenericSet
 #include "TArrayF.h"
@@ -70,5 +82,3 @@ class R3BSofSciRawTofPar : public FairParGenericSet
 
     ClassDef(R3BSofSciRawTofPar, 1);
 };
-
-#endif //__R3BSOFSCIRAWTOFPAR_H__
diff --git a/tcal/R3BSofTcalContFact.cxx b/tcal/R3BSofTcalContFact.cxx
@@ -1,3 +1,16 @@
+/******************************************************************************
+ *   Copyright (C) 2017 GSI Helmholtzzentrum für Schwerionenforschung GmbH    *
+ *   Copyright (C) 2017-2025 Members of R3B Collaboration                     *
+ *                                                                            *
+ *             This software is distributed under the terms of the            *
+ *                 GNU Lesser General Public Licence (LGPL) version 3,        *
+ *                    copied verbatim in the file "LICENSE".                  *
+ *                                                                            *
+ * In applying this license GSI does not waive the privileges and immunities  *
+ * granted to it by virtue of its status as an Intergovernmental Organization *
+ * or submit itself to any jurisdiction.                                      *
+ ******************************************************************************/
+
 // ----------------------------------------------------------------
 // -----        R3BSofTcalContFact source file                -----
 // -----    Created 22/09/18  by J.L. Rodriguez-Sanchez       -----
@@ -92,5 +105,4 @@ FairParSet* R3BSofTcalContFact::createContainer(FairContainer* c)
 
     return p;
 }
-
-ClassImp(R3BSofTcalContFact);
+ClassImp(R3BSofTcalContFact)
diff --git a/tcal/R3BSofTcalContFact.h b/tcal/R3BSofTcalContFact.h
@@ -1,11 +1,17 @@
-// -------------------------------------------------------------------
-//								   -----
-//  Factory for the parameter containers in libR3BSofTcal        -----
-//								   -----
-// -------------------------------------------------------------------
-
-#ifndef R3BSOFTCALCONTFACT_H
-#define R3BSOFTCALCONTFACT_H
+/******************************************************************************
+ *   Copyright (C) 2017 GSI Helmholtzzentrum für Schwerionenforschung GmbH    *
+ *   Copyright (C) 2017-2025 Members of R3B Collaboration                     *
+ *                                                                            *
+ *             This software is distributed under the terms of the            *
+ *                 GNU Lesser General Public Licence (LGPL) version 3,        *
+ *                    copied verbatim in the file "LICENSE".                  *
+ *                                                                            *
+ * In applying this license GSI does not waive the privileges and immunities  *
+ * granted to it by virtue of its status as an Intergovernmental Organization *
+ * or submit itself to any jurisdiction.                                      *
+ ******************************************************************************/
+
+#pragma once
 
 #include "FairContFact.h"
 
@@ -24,5 +30,3 @@ class R3BSofTcalContFact : public FairContFact
 
     ClassDef(R3BSofTcalContFact, 1);
 };
-
-#endif // R3BTCALCONTFACT_H
diff --git a/tcal/R3BSofTcalPar.cxx b/tcal/R3BSofTcalPar.cxx
@@ -1,3 +1,16 @@
+/******************************************************************************
+ *   Copyright (C) 2017 GSI Helmholtzzentrum für Schwerionenforschung GmbH    *
+ *   Copyright (C) 2017-2025 Members of R3B Collaboration                     *
+ *                                                                            *
+ *             This software is distributed under the terms of the            *
+ *                 GNU Lesser General Public Licence (LGPL) version 3,        *
+ *                    copied verbatim in the file "LICENSE".                  *
+ *                                                                            *
+ * In applying this license GSI does not waive the privileges and immunities  *
+ * granted to it by virtue of its status as an Intergovernmental Organization *
+ * or submit itself to any jurisdiction.                                      *
+ ******************************************************************************/
+
 #include "R3BSofTcalPar.h"
 
 #include "FairDetParIo.h"
@@ -137,4 +150,4 @@ void R3BSofTcalPar::printParams()
     }
 }
 
-ClassImp(R3BSofTcalPar);
+ClassImp(R3BSofTcalPar)
diff --git a/tcal/R3BSofTcalPar.h b/tcal/R3BSofTcalPar.h
@@ -1,5 +1,17 @@
-#ifndef R3BSOFTCALPAR_H
-#define R3BSOFTCALPAR_H
+/******************************************************************************
+ *   Copyright (C) 2017 GSI Helmholtzzentrum für Schwerionenforschung GmbH    *
+ *   Copyright (C) 2017-2025 Members of R3B Collaboration                     *
+ *                                                                            *
+ *             This software is distributed under the terms of the            *
+ *                 GNU Lesser General Public Licence (LGPL) version 3,        *
+ *                    copied verbatim in the file "LICENSE".                  *
+ *                                                                            *
+ * In applying this license GSI does not waive the privileges and immunities  *
+ * granted to it by virtue of its status as an Intergovernmental Organization *
+ * or submit itself to any jurisdiction.                                      *
+ ******************************************************************************/
+
+#pragma once
 
 #include "FairParGenericSet.h"
 #include "TArrayF.h"
@@ -79,5 +91,3 @@ class R3BSofTcalPar : public FairParGenericSet
 
     ClassDef(R3BSofTcalPar, 1);
 };
-
-#endif // R3BSOFTCALPAR_H