MultipleTesting v0.6.0

Version 0.6.0

Changes

• Upgrades julia compat to 1.6 (#127)
• Upgrade StatsBase compat to 0.34 (#127)
• Fixes tests where the error type changed in recent julia versions (#127)

Support

• Supports julia v1.6 and newer

MultipleTesting v0.5.0

Version 0.5.0

Changes

• Improve the reordering strategy of p-values in adjustment methods. This change saves one sorting step for all adjustment methods that require sorted p-values. As a result, the performance for these methods is significantly improved.
• Rename p-value combination types, in order to improve consistency with other types.

Support

• Supports julia v1.4 and newer

MultipleTesting.jl v0.4.1

Version 0.4.1

Changes

• Update continuous integration configuration
• Add support for julia v1.0

Support

• Supports julia v0.7 and v1.0

MultipleTesting.jl v0.4.0

Version 0.4.0

Changes

User-facing changes

• Require julia v0.7 as the minimum version, drop support for julia v0.6
• Describe package features in the documentation

Support

• Requires julia 0.7

MultipleTesting.jl v0.3.1

Version 0.3.1

New Features

• Build and deploy the package documentation (#94)

Changes

User-facing changes

• Fix Barber-Candes adjustemt if all p-values are < 0.5 (#93)
• Update the documentation notebooks (#88)
• Type the adjust methods (#90)
• Rename the adjustment field in TwoStep type (#89)

Internal changes

• Optimise the Hommel adjustment (#91)
• Enable fast finishing for CI builds (#92)

MultipleTesting.jl v0.3.0

Version 0.3.0

New Features

• Convex decreasing density estimator for π0 (#56)
• Higher criticism scores (HigherCriticismScores) and threshold (HigherCriticismThreshold) estimation (#55)
• List of publications which describe the implemented statistical methods (#54, #65, #81, #83)

Changes

User-facing changes

• Fix p-value adjustments with unsorted inputs (#66)
• Speed up p-value combinations (#75)
• Define return types for p-value combinations (#76)
• Unify methods for weighted Stouffer combination (#84)
• Update documentation notebooks (#67)
• Drop support for julia 0.5, require julia 0.6 as the minimum version (#52, #64, #58, #82)

Internal changes

• Simplify the step functions for p-value adjustments (#77)
• Simplify the method structure (#74)
• Switch to new julia syntax, with preliminary support for julia 0.7 (#71, #78)
• Update tests and references for p-value combinations (#70)
• Use clamp for better bounding of estimates (#85, #82)
• Support the new Distributions interface (#52)
• Drop the Compat dependency (#53)
• Link comic logo in the readme file as an external resource (#69)

Removed

• Drop qvalues in favour of BH-adjusted p-values (#73).

Support

• Requires julia 0.6
• Preliminary support for julia 0.7 nightly builds

MultipleTesting.jl v0.2.3

Version 0.2.3

Changes

• Switch to new Weights type in StatsBase (≧ v0.15.0)

MultipleTesting.jl v0.2.2

Version 0.2.2

Changes

• Makes the PValues type immutable and persistent
• Finalises support of julia 0.6 with testing

Support

• Requires julia 0.5 or 0.6

MultipleTesting.jl v0.2.1

Version 0.2.1

Changes

• Adds compatibility with julia 0.6 development versions, including automated tests
• Fixes Censored BUM π0 edge case when all p-values are equal to 1
• Updates test cases and reference values for qValues
• Introduces Compat as a new dependency
• Separates test coverage reports for different julia versions

Support

• Requires julia 0.5 or 0.6

MultipleTesting.jl v0.2.0

Version 0.2.0

New Features

• Combination of p-values through the combine interface:
  • Fisher
  • Stouffer
  • Logit
  • Wilkinson
  • Simes
  • Tippett
  • Minimum of adjusted p-values
• Analysis notebook for p-value combinations
• PValues type: Representation of vectors with p-values
• Adjustments of p-values support specifying the total number of tests
• Barber-Candès p-value adjustment

Changes

• Optimised Benjamini-Liu p-value adjustment and test cases
• Estimator types are now immutables
• Harmonised type names
• Restructed readme
• Simplified method signatures
• Various performance improvements

Removed

• Export of lower-level functions for p-value adjustment

Support

• Requires julia 0.5