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Support for SummarizedExperiment formats
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@jkanche jkanche released this 09 Oct 16:39
· 53 commits to master since this release
v2.4.0
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Learn about vigilant mode.
  • A SummarizedExperiment object saved in the RDS (*.rds) format. We support any SummarizedExperiment subclass containing a dense or sparse count matrix (identified as any assay with name starting with "counts", or if none exist, just the first assay). For a SingleCellExperiment, any alternative experiment with name starting with "hto", "adt" or "antibody" is assumed to represent CITE-seq data.
  • Minor fixes to UI issues when switching between modalities, versus mode and selecting weights

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