Merge pull request #65 from kbase/dev_plotly_extension

plotly extension + user lib installation bug

Dockerfile

@@ -35,13 +35,21 @@ RUN chown -R spark_user:spark /opt/bitnami
 RUN mkdir -p /opt/yarn/conf && chown -R spark_user:spark /opt/yarn
 ENV YARN_CONF_DIR=/opt/yarn/conf
 
+# Use the spark user for pipenv installation
+USER spark_user
+# Set home directory for the spark user so that pipenv can install packages properly with spark user permissions
+ENV HOME=/opt/bitnami
+
 # install pipenv
 RUN pip3 install pipenv
 
 # install python dependencies
 COPY Pipfile* ./
 RUN pipenv sync --system
 
+# Switch back to root to install Jupyter and other setup
+USER root
+
 # Set up Jupyter directories
 ENV JUPYTER_CONFIG_DIR=/.jupyter
 ENV JUPYTER_RUNTIME_DIR=/.jupyter/runtime

Pipfile

@@ -18,7 +18,7 @@ urllib3 = "==2.2.2"
 jupyterlab-git = "==0.50.1"
 jupyter-collaboration = "==2.1.2"
 cdm-jupyterlab-brand-extension = {file = "https://github.com/kbaseincubator/cdm_jupyterlab_brand_extension/raw/main/dist/cdm_jupyterlab_brand_extension-0.1.0-py3-none-any.whl"}
-matplotlib = "==3.9.0"  # on the Notebook, the first installation attempt may fail, but the second attempt will succeed.
+plotly = "==5.23.0"
 
 [dev-packages]
 pytest = "==8.3.2"