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@shahcompbio @camlab-bioml

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  1. ouija Public

    Descriptive probabilistic marker gene approach to single-cell pseudotime inference

    R 28 3

  2. clonealign Public

    Bayesian inference of clone-specific gene expression estimates by integrating single-cell RNA-seq and single-cell DNA-seq data

    R 32 6

  3. Irrationone/cellassign Public

    Automated, probabilistic assignment of cell types in scRNA-seq data

    R 197 83

  4. phenopath Public

    Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds

    C++ 10

  5. switchde Public

    Inference of switch-like differential expression along single-cell trajectories

    R 19 4

  6. ouijaflow Public

    Probabilistic single-cell pseudotime with Edward+Tensorflow

    Python 12 1

124 contributions in the last year

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Contribution activity

December 2024

1 contribution in private repositories Dec 16
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