Reformat to 100 line length #441
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| name: Tests | ||
| on: | ||
| push: | ||
| branches: | ||
| - main | ||
| - main-release | ||
| pull_request: | ||
| merge_group: | ||
| workflow_dispatch: | ||
| env: | ||
| SpringerNatureAPIKey: ${{ secrets.SpringerNatureAPIKey }} | ||
| AstrophysicsDataSystemAPIKey: ${{ secrets.AstrophysicsDataSystemAPIKey }} | ||
| IEEEAPIKey: ${{ secrets.IEEEAPIKey }} | ||
| BiodiversityHeritageApiKey: ${{ secrets.BiodiversityHeritageApiKey}} | ||
| GRADLE_OPTS: -Xmx4g | ||
| JAVA_OPTS: -Xmx4g | ||
| concurrency: | ||
| group: tests-${{ github.head_ref }} | ||
| cancel-in-progress: true | ||
| permissions: | ||
| pull-requests: write | ||
| jobs: | ||
| checkstyle: | ||
| name: Checkstyle | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout source (PR) | ||
| if: github.event_name == 'pull_request' | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| ref: ${{ github.head_ref }} | ||
| repository: ${{ github.event.pull_request.head.repo.full_name }} | ||
| submodules: 'true' | ||
| show-progress: 'false' | ||
| - name: Checkout source (no-PR) | ||
| if: github.event_name != 'pull_request' | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'true' | ||
| show-progress: 'false' | ||
| - name: Install prettier-plugin-java | ||
| run: npm install | ||
| - name: Check code style (using prettier-java) | ||
| if: github.event_name == 'pull_request' && github.event.pull_request.head.repo.full_name != github.repository | ||
| uses: creyD/[email protected] | ||
| with: | ||
| prettier_options: --check **/*.java | ||
| prettier_plugins: "prettier-plugin-java" | ||
| clean_node_folder: false | ||
| dry: true | ||
| - name: Reformat code (using prettier-java) | ||
| if: "!(github.event_name == 'pull_request' && github.event.pull_request.head.repo.full_name != github.repository)" | ||
| uses: creyD/[email protected] | ||
| with: | ||
| prettier_options: --write **/*.java | ||
| prettier_plugins: "prettier-plugin-java" | ||
| clean_node_folder: false | ||
| - name: Set up JDK | ||
| uses: actions/setup-java@v3 | ||
| with: | ||
| java-version: 21.0.1 | ||
| distribution: 'liberica' | ||
| cache: 'gradle' | ||
| - name: Run checkstyle reporter | ||
| uses: nikitasavinov/checkstyle-action@master | ||
| with: | ||
| reporter: github-pr-review | ||
| github_token: ${{ secrets.GITHUB_TOKEN }} | ||
| checkstyle_config: 'config/checkstyle/checkstyle_reviewdog.xml' | ||
| checkstyle_version: '10.3' | ||
| - name: Run checkstyle using gradle | ||
| run: ./gradlew checkstyleMain checkstyleTest checkstyleJmh | ||
| openrewrite: | ||
| name: OpenRewrite | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'true' | ||
| show-progress: 'false' | ||
| - name: Set up JDK | ||
| uses: actions/setup-java@v3 | ||
| with: | ||
| java-version: 21.0.1 | ||
| distribution: 'liberica' | ||
| cache: 'gradle' | ||
| - name: Run OpenRewrite | ||
| run: | | ||
| ./gradlew rewriteDryRun | ||
| modernizer: | ||
| name: Modernizer | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'true' | ||
| show-progress: 'false' | ||
| - name: Set up JDK | ||
| uses: actions/setup-java@v3 | ||
| with: | ||
| java-version: 21.0.1 | ||
| distribution: 'liberica' | ||
| cache: 'gradle' | ||
| - name: Run modernizer | ||
| run: | | ||
| # enable failing of this task if modernizer complains | ||
| sed -i "s/failOnViolations = false/failOnViolations = true/" build.gradle | ||
| ./gradlew modernizer | ||
| markdown: | ||
| name: Markdown | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'false' | ||
| show-progress: 'false' | ||
| - name: markdownlint-cli2-action | ||
| uses: DavidAnson/markdownlint-cli2-action@v13 | ||
| with: | ||
| globs: | | ||
| *.md | ||
| docs/**/*.md | ||
| changelog: | ||
| name: CHANGELOG.md | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'false' | ||
| show-progress: 'false' | ||
| - name: Lint CHANGELOG.md | ||
| run: | | ||
| # Install jbang | ||
| curl -Ls https://sh.jbang.dev | bash -s - app setup | ||
| export PATH=$PATH:$HOME/.jbang/bin | ||
| # run heylogs verification | ||
| jbang com.github.nbbrd.heylogs:heylogs-cli:0.7.2:bin check CHANGELOG.md > heylogs.txt || true | ||
| # improve output | ||
| sed -i 's/all-h2-contain-a-version/all-h2-contain-a-version (ignored)/' heylogs.txt | ||
| cat heylogs.txt | ||
| # exit 1 in case of error | ||
| # We have 1 "valid" issue in CHANGELOG.md | ||
| grep -q "1 problem" heylogs.txt || exit 1 | ||
| changelog-unreleased-only: | ||
| name: CHANGELOG.md - only unreleased touched | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'false' | ||
| show-progress: 'false' | ||
| fetch-depth: 0 | ||
| - name: Install clparse | ||
| run: | | ||
| curl -LO https://github.com/marcaddeo/clparse/releases/download/0.9.1/clparse-0.9.1-x86_64-unknown-linux-musl.tar.gz | ||
| tar xzvf clparse-0.9.1-x86_64-unknown-linux-musl.tar.gz | ||
| sudo mv clparse /usr/local/bin/clparse | ||
| - name: Check CHANGELOG.md diff | ||
| run: | | ||
| diff \ | ||
| <(git show origin/main:CHANGELOG.md | clparse --format=json --separator=– - | jq '.releases[] | select(.version != null)') \ | ||
| <(git show HEAD:CHANGELOG.md | clparse --format=json --separator=– - | jq '.releases[] | select(.version != null)') | ||
| tests: | ||
| name: Unit tests | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'true' | ||
| show-progress: 'false' | ||
| - name: Set up JDK | ||
| uses: actions/setup-java@v3 | ||
| with: | ||
| java-version: 21.0.1 | ||
| distribution: 'liberica' | ||
| cache: 'gradle' | ||
| - name: Run tests | ||
| run: xvfb-run --auto-servernum ./gradlew check -x checkstyleJmh -x checkstyleMain -x checkstyleTest -x modernizer | ||
| env: | ||
| CI: "true" | ||
| - name: Format failed test results | ||
| if: failure() | ||
| run: | | ||
| sudo apt-get install -qq -y xml-twig-tools xsltproc | ||
| scripts/after-failure.sh | ||
| databasetests: | ||
| name: Database tests | ||
| runs-on: ubuntu-latest | ||
| services: | ||
| postgres: | ||
| image: postgres:13-alpine | ||
| env: | ||
| POSTGRES_USER: postgres | ||
| POSTGRES_PASSWORD: postgres | ||
| POSTGRES_DB: postgres | ||
| ports: | ||
| - 5432:5432 | ||
| # needed because the postgres container does not provide a healthcheck | ||
| options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5 | ||
| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'true' | ||
| show-progress: 'false' | ||
| - name: Set up JDK | ||
| uses: actions/setup-java@v3 | ||
| with: | ||
| java-version: 21.0.1 | ||
| distribution: 'liberica' | ||
| cache: 'gradle' | ||
| - name: Run tests on PostgreSQL | ||
| run: ./gradlew databaseTest --rerun-tasks | ||
| env: | ||
| CI: "true" | ||
| DBMS: "postgresql" | ||
| - name: Shutdown Ubuntu MySQL | ||
| run: sudo service mysql stop # Shutdown the Default MySQL, "sudo" is necessary, please not remove it | ||
| - name: Start custom MySQL | ||
| uses: mirromutth/[email protected] | ||
| with: | ||
| host port: 3800 | ||
| container port: 3307 | ||
| character set server: 'utf8' | ||
| collation server: 'utf8_general_ci' | ||
| mysql version: '8.0' | ||
| mysql database: 'jabref' | ||
| mysql root password: 'root' | ||
| - name: Run tests on MySQL | ||
| run: ./gradlew databaseTest --rerun-tasks | ||
| env: | ||
| CI: "true" | ||
| DBMS: "mysql" | ||
| guitests: | ||
| name: GUI tests | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'true' | ||
| show-progress: 'false' | ||
| - name: Set up JDK | ||
| uses: actions/setup-java@v3 | ||
| with: | ||
| java-version: 21.0.1 | ||
| distribution: 'liberica' | ||
| cache: 'gradle' | ||
| - name: Run GUI tests | ||
| run: xvfb-run --auto-servernum ./gradlew guiTest | ||
| env: | ||
| CI: "true" | ||
| codecoverage: | ||
| name: Code coverage | ||
| runs-on: ubuntu-latest | ||
| services: | ||
| postgres: | ||
| image: postgres:10.8 | ||
| env: | ||
| POSTGRES_USER: postgres | ||
| POSTGRES_PASSWORD: postgres | ||
| POSTGRES_DB: postgres | ||
| ports: | ||
| - 5432:5432 | ||
| # needed because the postgres container does not provide a healthcheck | ||
| options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5 | ||
| steps: | ||
| - name: Check secrets presence | ||
| id: checksecrets | ||
| if: github.ref == 'refs/heads/main' | ||
| shell: bash | ||
| run: | | ||
| if [ "$CODECOV_TOKEN" == "" ]; then | ||
| echo "secretspresent=NO" >> $GITHUB_OUTPUT | ||
| else | ||
| echo "secretspresent=YES" >> $GITHUB_OUTPUT | ||
| fi | ||
| env: | ||
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | ||
| - name: Checkout source | ||
| if: github.ref == 'refs/heads/main' | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| submodules: 'true' | ||
| show-progress: 'false' | ||
| - name: Set up JDK | ||
| if: github.ref == 'refs/heads/main' | ||
| uses: actions/setup-java@v3 | ||
| with: | ||
| java-version: 21.0.1 | ||
| distribution: 'liberica' | ||
| cache: 'gradle' | ||
| - name: Update test coverage metrics | ||
| if: (github.ref == 'refs/heads/main') && (steps.checksecrets.outputs.secretspresent == 'YES') | ||
| run: xvfb-run --auto-servernum ./gradlew jacocoTestReport | ||
| env: | ||
| CI: "true" | ||
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | ||
| DBMS: "postgresql" | ||
| - uses: codecov/codecov-action@v3 | ||
| if: (github.ref == 'refs/heads/main') && (steps.checksecrets.outputs.secretspresent == 'YES') | ||
| with: | ||
| token: ${{ secrets.CODECOV_TOKEN }} | ||
| # This is https://github.com/marketplace/actions/gradle-wrapper-validation | ||
| # It ensures that the jar file is from gradle and not by a strange third party. | ||
| gradlevalidation: | ||
| name: "Validate Gradle Wrapper" | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| with: | ||
| show-progress: 'false' | ||
| - uses: gradle/wrapper-validation-action@v1 | ||
| # This ensures that no git merge conflict markers (<<<, ...) are contained | ||
| merge_conflict_job: | ||
| name: Find merge conflicts | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| with: | ||
| show-progress: 'false' | ||
| - name: Merge Conflict finder | ||
| uses: olivernybroe/[email protected] | ||
