Estimate relative fitness from competition assays based on viable count data
The python code was written by Robert Clegg [email protected] to analyse viable count data from competition assays to evaluate relative fitness with confidence intervals. The code has been used to analyse data in this preprint: Feng Dong, Ana C. Quevedo, Xiang Wang, Eugenia Valsami-Jones, Jan-Ulrich Kreft (2020). Experimental Evolution of Pseudomonas putida under Silver Ion versus Nanoparticle Stress. https://www.biorxiv.org/content/10.1101/2020.09.17.302794v2
For more information, email Jan-Ulrich Kreft ([email protected])