CAESAR 1.0.3

Minor Change

• adds the date of the end of selection process in summary.out

CAESAR 1.0.2

Minor change

• The running date is written in the header of the summary.out file
• The date of publication (or update) of each database can be indicated in the configuration file. Otherwise, the file creation date is indicated in the summary.out file.

CAESAR 1.0.1

Fix

• adds the -m, --mem option to the hmmsearch, filter and clustering subcommands

Docs

• adds the release link in the README to download the code

CAESAR 1.0.0

Features

• Sequence search with Blastp (using Diamond) or Hmmsearch
• Filters the sequences retrieved
• Clustering of filtered sequences with Diamond
• Selection of n candidates for each group based on collections of organisms (user provided and private)
• Builds a phylogenetic tree with Mafft and FastTree