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📝 Cosmetics for vitessce guide
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falexwolf committed Sep 5, 2024
1 parent 3a8f57c commit 90021b8
Showing 1 changed file with 7 additions and 2 deletions.
9 changes: 7 additions & 2 deletions docs/vitessce.ipynb
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"zarr_artifact = ln.Artifact(\n",
" zarr_filepath,\n",
" description=\"Habib et al., 2017 Nature Methods, optimized anndata zarr\",\n",
" type=\"dataset\",\n",
")\n",
"zarr_artifact.save()"
]
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"cell_type": "markdown",
"metadata": {},
"source": [
"You can now see the Vitessce button show up on your dataset as in this [example dataset](https://lamin.ai/laminlabs/lamindata/artifact/HXJ4DDAw8012jVKwoxgd)."
":::{note}\n",
"\n",
"You can now see the Vitessce button show up on your dataset as in this [example dataset](https://lamin.ai/laminlabs/lamindata/artifact/HXJ4DDAw8012jVKwoxgd).\n",
"\n",
":::"
]
},
{
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"cell_type": "markdown",
"metadata": {},
"source": [
":::{note}\n",
":::{dropdown} Upload speed\n",
"\n",
"Here is [a note](https://lamin.ai/laminlabs/lamindata/transform/WDjio16cQsdW5zKv) on folder upload speed and we why chose not to use the `.export(to=\"s3\")` functionality of Vitessce.\n",
"\n",
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