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vieiramesquita authored Jun 28, 2024
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![Vinícius Mesquita / DALEE - theropod, jurassic landscape, digital art, hight quality](Logo.jpg)
![Vinícius Mesquita / DALEE - theropod, jurassic landscape, digital art, hight quality](assets/Logo.jpg)

#

- ${\color{red}T} im {\color{red}e}\ Se {\color{red}r} ies\ Extracti {\color{red}o} n\ for\ {\color{red}Po} lygonal\ {\color{red}Da} ta$
# **Time Series Extraction for Polygonal Data**

### Name
- T(h)eroPoDa + - Time Series Extraction for Polygonal Data and Trend Analysis ⬛
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- Scikit-learn
- Joblib
- Psutil
- [scikit-map](https://pages.github.com/)
- [Earthengine-api](https://developers.google.com/earth-engine/guides/python_install)
- [scikit-map](https://github.com/openlandmap/scikit-map)

### How to use

- In this version of TheroPoDa (1.1.0), you could extract a series of median NDVI from Sentinel 2 for a Feature Collection of polygons simplily by passing arguments to the python code exemplified below:

| argument | usage | example |
|:-------------:|:--------------------------------------------------:|:---------|
| --asset | Choosed Earth Engine Vector Asset | users/vieiramesquita/LAPIG_FieldSamples/lapig_goias_fieldwork_2022_50m |
| --id_field | Vector column used as ID (use unique identifiers!) | ID_POINTS |
| --output_name | Output filename | LAPIG_Pasture_S2_NDVI_Monitoring_FieldWork |

If you don't know how to upload your vector data in Earth Engine, you can follow the tutotial [clicking this link.](https://developers.google.com/earth-engine/guides/table_upload)

#### Command line example
| argument | usage | example |
|:-------------:|:--------------------------------------------------: |:---------|
| --asset | Choosed Earth Engine Vector Asset | users/vieiramesquita/LAPIG_FieldSamples/lapig_goias_fieldwork_2022_50m |
| --id_field | Vector column used as ID (use unique identifiers!) | ID_POINTS |
| --output_name | Output filename | LAPIG_Pasture_S2_NDVI_Monitoring_FieldWork |

```bash
python theropoda.py --asset users/vieiramesquita/LAPIG_FieldSamples/lapig_goias_fieldwork_2022_50m --id_field ID_POINTS --output_name LAPIG_Pasture_S2_NDVI_Monitoring_FieldWork
```

If you don't know how to upload your vector data in Earth Engine, you can follow the tutotial [clicking this link.](https://developers.google.com/earth-engine/guides/table_upload)

### Roadmap

- Implement arguments to choose other zonal reducers (i.e. percentile, variance, etc.)
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