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@lbl-cbg

Computational Biosciences Group, LBNL

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  1. deep-taxon deep-taxon Public

    Code for using deep learning for microbial taxonomy classification

    Python 3 2

  2. metfish metfish Public

    Code for the MetFish LDRD project

    Python 3

  3. CAT CAT Public

    Forked from MGXlab/CAT_pack

    CAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)

    Python 2

  4. gtnet gtnet Public

    The Genome Taxonomy Network for assigning microbial taxonomy to DNA sequences

    Python 1

  5. alphafold-old alphafold-old Public

    Forked from google-deepmind/alphafold

    Open source code for AlphaFold.

    Python 1

  6. t5-commons t5-commons Public

    Code required for the Taskforce5 commons project.

    JavaScript 1

Repositories

Showing 10 of 14 repositories
  • lmcontrol Public

    Tools for light microscopy based bioreactor control

    lbl-cbg/lmcontrol’s past year of commit activity
    Jupyter Notebook 0 1 2 1 Updated Dec 20, 2024
  • metfish Public

    Code for the MetFish LDRD project

    lbl-cbg/metfish’s past year of commit activity
    Python 3 0 0 3 Updated Dec 6, 2024
  • CAT Public Forked from MGXlab/CAT_pack

    CAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)

    lbl-cbg/CAT’s past year of commit activity
    Python 2 MIT 32 0 0 Updated Dec 5, 2024
  • t5-data Public
    lbl-cbg/t5-data’s past year of commit activity
    Python 1 0 1 0 Updated Nov 21, 2024
  • deep-taxon Public

    Code for using deep learning for microbial taxonomy classification

    lbl-cbg/deep-taxon’s past year of commit activity
    Python 3 2 1 7 Updated Sep 4, 2024
  • t5-commons Public

    Code required for the Taskforce5 commons project.

    lbl-cbg/t5-commons’s past year of commit activity
    JavaScript 1 0 9 0 Updated Aug 30, 2024
  • alphaflow Public Forked from bjing2016/alphaflow

    AlphaFold Meets Flow Matching for Generating Protein Ensembles

    lbl-cbg/alphaflow’s past year of commit activity
    Python 0 MIT 51 1 0 Updated Aug 23, 2024
  • Str2Str Public Forked from lujiarui/Str2Str

    Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)

    lbl-cbg/Str2Str’s past year of commit activity
    Python 0 MIT 6 0 0 Updated Mar 7, 2024
  • gtnet Public

    The Genome Taxonomy Network for assigning microbial taxonomy to DNA sequences

    lbl-cbg/gtnet’s past year of commit activity
    Python 1 0 5 0 Updated Mar 5, 2024
  • nwb-cloud-io Public
    lbl-cbg/nwb-cloud-io’s past year of commit activity
    Shell 0 0 0 0 Updated Feb 21, 2024

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