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Minimap2-2.14 (r883)

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@lh3 lh3 released this 06 Nov 05:04
· 324 commits to master since this release

Notable changes:

  • Fixed two minor bugs caused by typos (#254 and #262).

  • Fixed a bug that made minimap2 abort when --eqx was used together with --MD
    or --cs (#257).

  • Added --cap-sw-mem to cap the size of DP matrices (#259). Base alignment may
    take a lot of memory in the splicing mode. This may lead to issues when we
    run minimap2 on a cluster with a hard memory limit. The new option avoids
    unlimited memory usage at the cost of missing a few long introns.

  • Conforming to C99 and C11 when possible (#261).

  • Warn about malformatted FASTA or FASTQ (#252 and #255).

This release occasionally produces base alignments different from v2.13. The
overall alignment accuracy remains similar.

(2.14: 5 November 2018, r883)