Exposes as param executor, errorStrategy

lifebit-ai · Jan 21, 2021 · a85a0d0 · a85a0d0
1 parent a2867de
commit a85a0d0
Showing 1 changed file with 5 additions and 3 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -1,7 +1,10 @@
 params {
+	executor = 'ignite'
+	errorStrategy = 'ignore'
 	processA_cpus = 1
 	echo = false
 	s3Location = 's3://lifebit-featured-datasets/pipelines/spammer-nf/input_files'
+	fileSuffix = ''
 	repsProcessA = 10
 	processAWriteToDiskMb = 10
 	processATimeRange = "1-2"
@@ -21,7 +24,7 @@ docker.enabled = true
 
 process {
 	cpus =  1
-	errorStrategy = 'retry'
+	errorStrategy = params.errorStrategy
 	container = "quay.io/lifebitai/ubuntu:18.10"
 
 	withName: processA {
@@ -31,7 +34,6 @@ process {
 }
 
 executor {
-	name = 'ignite'
+	name = params.executor
 	queueSize = 1000
-	pollInterval = '30sec'
 }