Code

Private ips setup#2

Code

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cgpu wants to merge 37 commits intostage-cloud-storage-fileslifebit-ai/spammer-nf:stage-cloud-storage-filesfrom private-ips-setuplifebit-ai/spammer-nf:private-ips-setupCopy head branch name to clipboard

+98-11

Commits

Commits on Mar 10, 2021

• Update nextflow.config

  cgpu

  authored
  43d8cfb

• Rename s3Location to be cloud agnostic

  cgpu

  authored
  d207346

Commits on Mar 11, 2021

• Adds google.config

  cgpu

  authored
  1947089

• Update nextflow.config

  cgpu

  authored
  016346b

• Adds gls info in main.nf

  cgpu

  authored
  41d0089

• Update google.config

  cgpu

  authored
  c76c322

• Inits processAMachineType to false

  cgpu

  committed
  0688754

• Removes machineType

  cgpu

  committed
  0586b93

• Adds google.lifeSciences.usePrivateAddress

  cgpu

  committed
  b522e7b

• Replaces s3Location with cloudStorageLocation

  cgpu

  committed
  19589e1

• Update nextflow.config

  cgpu

  authored
  41d2be9

• Update nextflow.config

  cgpu

  authored
  f0a00e0

Commits on Mar 12, 2021

• Updates publishDir; Updates s3 -> agnostic

  cgpu

  committed
  a186a42

• Updates branch

  cgpu

  committed
  a142cb2

Commits on Mar 14, 2021

• Adds option to gls_sshDaemon

  cgpu

  committed
  015de36

Commits on Apr 12, 2021

• Absorbs latest changes from stage-cloud-storage-files

  cgpu

  committed
  4cad33c

• Adds private ip params in log.info

  cgpu

  authored
  bea3be8

• Adds empty line

  cgpu

  authored
  13e1fd0

Commits on Apr 23, 2021

• Removes defaultBranch

  cgpu

  committed
  edc502b

Commits on May 12, 2021

• Removes log.info "defaultBranch"

  cgpu

  committed
  28f6019

• Sets default gls copyImage to gcr.io

  cgpu

  committed
  13c1cc4

• Adds sshImage and copyImage as params

  cgpu

  committed
  1f7bc34

Commits on May 14, 2021

• Updates container for google cloud config

  cgpu

  authored
  db87f42

Commits on May 20, 2021

• Adds awsbatch.config

  cgpu

  authored
  4479be5

• Parameterises batch options

  cgpu

  authored
  fd4e2c0

• Adds aws batch params in log.info header

  cgpu

  authored
  6f1ab7c

• Fix param name typo

  cgpu

  authored
  8308a1f

Commits on May 21, 2021

• Fix params name

  cgpu

  authored
  b9bafa9

Commits on Jul 1, 2021

• Update google.config

  cgpu

  authored
  38a3873

Commits on Aug 18, 2021

• Adds aws_ignite.config in conf/

  cgpu

  authored
  1561fbb

• Experimentally add execution vars in print header

  cgpu

  authored
  e18bf80

• Adds defaults for ignite on AWS

  cgpu

  authored
  909119a

• Adds defaults for ignite on AWS

  cgpu

  authored
  94ff60a

Commits on Aug 24, 2021

• Adds command-logs folder in results (.command*)

  cgpu

  committed
  d72c3a2

Commits on Sep 28, 2021

• Adds qa.config

  cgpu

  authored
  161df30

• Update qa.config

  cgpu

  authored
  e66ab54

Commits on Oct 6, 2021

• Updates regex * -> ** [traverse nested folders]

  cgpu

  authored
  6cc20ea