- UCSCXenaShiny is an R package for interactively exploring UCSC Xena datasets. It is mainly designed to provide a web app (built on the top of
{shiny}framework and{UCSCXenaTools}package) for downloading, analyzing and visualizing datasets from UCSC Xena. - In the latest version, the application can support both general and personalized tumor molecular analysis with versatile functional modules and user-friendly interface layouts. Overall, our tool aims to make best use of public omics data from UCSC Xena and assist broad user community with precision oncology research.
- Here, we have prepared the tutorial book (https://github.com/lishensuo/UCSCXenaShiny_Book.io) to introduce the detailed usage of UCSCXenaShiny based on R Markdown and bookdown.
