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preprocessing: Add "consensus" release date field (with whatever nomenclature) #2894

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theosanderson opened this issue Sep 27, 2024 · 0 comments

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@theosanderson
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Currently on Pathoplexus we default to showing an "NCBI release date" field. This is good because if we used the Pathoplexus release date field all sequences ingested from INSDC would have the same release date which wouldn't be useful. But it's bad because it is undefined for sequences submitted directly to pathoplexus. IMO we should create a consensus field which is the NCBI release date if set (which will generally also be the Pathoplexus release date for items submitted to INSDC after launch) and otherwise the Pathoplexus release date. I'm raising this in Loculus as the code implementation would be here.

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