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353 Open 718 Closed
353 Open 718 Closed
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Issues list

Store submissions files in submission db for better observability feature Feature proposal insdc tasks related to ENA/INSDC submission
#2961 opened Oct 7, 2024 by corneliusroemer
Does Address Line 1 need to be required for submitting groups? discussion Open questions
#2956 opened Oct 5, 2024 by chaoran-chen
4
Expose grafana on grafana.loculus.org
#2954 opened Oct 4, 2024 by corneliusroemer
7
Add plausible script for loculus.org (the docs, not the loculus instance) deployment Code changes targetting the deployment infrastructure feature Feature proposal
#2952 opened Oct 4, 2024 by corneliusroemer
Submit NCBI release date in external metadata as well feature Feature proposal insdc tasks related to ENA/INSDC submission
#2950 opened Oct 4, 2024 by corneliusroemer
We should inform users in the group form that "Institution" will be used as ENA center name feature Feature proposal website Tasks related to the web application
#2949 opened Oct 4, 2024 by corneliusroemer
Allow groups to add their papers in which they first published/describe their sequences backend related to the loculus backend component discussion Open questions feature Feature proposal ingest Ingest pipeline insdc tasks related to ENA/INSDC submission website Tasks related to the web application
#2948 opened Oct 4, 2024 by corneliusroemer
2
Add the gcaAccession field to the values.yaml
#2945 opened Oct 4, 2024 by anna-parker
1
Browse/search page navigations are not added to the browser history bug Something isn't working website Tasks related to the web application
#2942 opened Oct 3, 2024 by chaoran-chen
3
Propagate group edits to ENA projects feature Feature proposal insdc tasks related to ENA/INSDC submission
#2939 opened Oct 3, 2024 by corneliusroemer
The download button has no tooltip on sequence view modal feature Feature proposal website Tasks related to the web application
#2936 opened Oct 2, 2024 by JonasKellerer
Resize "All versions" dropdown on sequence view modal website Tasks related to the web application
#2935 opened Oct 2, 2024 by JonasKellerer
Unify casing of config values across preprocessing and ingest config Configuration related issues, i.e. helm processing deployment Code changes targetting the deployment infrastructure ingest Ingest pipeline preprocessing Issues related to the preprocessing component
#2933 opened Oct 2, 2024 by fengelniederhammer
2
Astro build lint: circular dependency codesmell For warnings/lints without immediate harm but to be fixed eventually website Tasks related to the web application
#2930 opened Oct 2, 2024 by corneliusroemer
Create rough documentation of the current config schema config Configuration related issues, i.e. helm processing documentation Improvements or additions to documentation
#2928 opened Oct 1, 2024 by chaoran-chen Priority 1 (highest)
1
@chaoran-chen
Refactor backend tests to allow parallelization backend related to the loculus backend component feature Feature proposal tests Test related issues
#2924 opened Oct 1, 2024 by corneliusroemer
3
Backend fasta parser does not treat fasta headers with spaces correctly (according to spec) backend related to the loculus backend component bug Something isn't working
#2923 opened Oct 1, 2024 by corneliusroemer
2
Incorrect validation messages for FASTA sequence upload errors backend related to the loculus backend component bug Something isn't working
#2922 opened Oct 1, 2024 by corneliusroemer
4
backend: document what happens to missing keys and empty fields in extract-unprocessed-data
#2919 opened Oct 1, 2024 by corneliusroemer
3
"backend client" for keycloak is misnamed
#2913 opened Sep 30, 2024 by theosanderson
Disable ENA submission by default, rename disableEnaSubmission to enableEnaSubmission
#2906 opened Sep 30, 2024 by anna-parker
I do not see that a sequence is being released as restricted on the approve/review page bug Something isn't working website Tasks related to the web application
#2902 opened Sep 30, 2024 by anna-parker
4
preprocessing: Add "consensus" release date field (with whatever nomenclature)
#2894 opened Sep 27, 2024 by theosanderson
Deposition: update accessions in external metadata as soon as available feature Feature proposal insdc tasks related to ENA/INSDC submission
#2893 opened Sep 27, 2024 by corneliusroemer
Make database secrets more consistent config Configuration related issues, i.e. helm processing refactoring Code requires refactoring
#2889 opened Sep 27, 2024 by corneliusroemer
1
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