GitHub - lsmainzer/WorkFor_iForgeGenomeGPS

Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
config		config
testdata		testdata
align.sh		align.sh
alignbam.sh		alignbam.sh
alignew2.sh		alignew2.sh
bam2fastq_WithReversamOption.sh		bam2fastq_WithReversamOption.sh
bwaS1.sh		bwaS1.sh
bwaS2.sh		bwaS2.sh
bwaS3.sh		bwaS3.sh
bwabamS1.sh		bwabamS1.sh
bwabamS2.sh		bwabamS2.sh
bwabamS3.sh		bwabamS3.sh
checkFastqQualityScores.pl		checkFastqQualityScores.pl
cleanup.sh		cleanup.sh
convertbam.sh		convertbam.sh
epilogue.sh		epilogue.sh
epilogue.user		epilogue.user
extract_reads_bam.sh		extract_reads_bam.sh
fastq.sh		fastq.sh
igvbam.sh		igvbam.sh
layer3.sh		layer3.sh
lned.pl		lned.pl
main2.sh		main2.sh
mergenodes.sh		mergenodes.sh
mergenovo.sh		mergenovo.sh
mergepicard.sh		mergepicard.sh
novobam.sh		novobam.sh
novosplit.sh		novosplit.sh
realign.sh		realign.sh
realign_new.sh		realign_new.sh
realrecalold.sh		realrecalold.sh
revertinputbam.sh		revertinputbam.sh
snvmix_to_vcf.pl		snvmix_to_vcf.pl
sortbammayo.sh		sortbammayo.sh
sortnode.sh		sortnode.sh
summary.sh		summary.sh
updateconfig.sh		updateconfig.sh
vcallgatk.sh		vcallgatk.sh
vcallmain.sh		vcallmain.sh