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Update qserv-ingest documentation
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fjammes authored and fritzm committed Jun 20, 2023
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51 changes: 0 additions & 51 deletions doc/admin/configuration.rst

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112 changes: 0 additions & 112 deletions doc/admin/docker.rst

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4 changes: 0 additions & 4 deletions doc/admin/index.rst
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**Information in this guide is known to be outdated.** A documentation sprint is underway which will
include updates and revisions to this guide.

.. highlight:: sql

####################
Administration Guide
####################

.. toctree::
:maxdepth: 4

docker
k8s
qserv-ingest/index
configuration
test-set
20 changes: 20 additions & 0 deletions doc/admin/k8s.rst
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##############################
Run Qserv on top of Kubernetes
##############################

Deployment
==========

The offical way to install Qserv is to run it on top of Kubernetes using
the `qserv-operator <https://qserv-operator.lsst.io>`_.

Administration
==============

Access to Qserv dashboard
-------------------------

This access is only available for users having access to the cluster with ``kubectl``.

.. code:: bash
# Open a tunnel between local machine and Qserv dashboard
kubectl port-forward qserv-repl-ctl-0 8080 &
# Access to the dashboard
firefox http://localhost:8080
69 changes: 69 additions & 0 deletions doc/admin/qserv-ingest/ingest.yaml
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version: 15
ingest:
http:
# Optional
# Timeout for POST and PUT queries in seconds
# POST and PUT queries which might be very long like:
# - postint contribution
# - closing transaction
# - publishing database
# have no timeout at all
write_timeout: 1800
# Optional
# Timeout for GET queries in seconds
read_timeout: 10
metadata:
# Optional
# Allow to customize metadata URL
# Default to "{servers[0]}{path}"
url: http://dataserver/datasets/DC2/

input:
# List of http servers providing input dataset
# The ingest process will load-balance the download of input files accross
# these servers.
# Use file:// as first element in list when using local data
# TODO Add support for webdav protocol
servers:
- http://dataserver
- http://dataserver
# Path to input data on the http servers
path: datasets/DC2/

## URLs of Qserv services
## ----------------------
qserv:
# URL which serves Qserv SQL queries
query_url: "mysql://qsmaster:@qserv-czar:4040"
# URL which serves input chunk contributions queue
queue_url: "mysql://qsingest:@qserv-ingest-db-0.qserv-ingest-db/qservIngest"
# Replication controller service URL
replication_url: http://qserv-repl-ctl-0.qserv-repl-ctl:8080

## Configure replication service
## Documented at https://confluence.lsstcorp.org/display/DM/1.+Setting+configuration+parameters
## --------------------------------------------------------------------------------------------
ingestservice:
# Optional, default to None
# Override the default value stored in input metadata (in database.json file)
# 1: build secondary index when closing a transaction
# 0: build secondary index after ingest
auto_build_secondary_index: 1

# Optional, default to "/etc/pki/tls/certs/ca-bundle.crt"
# cainfo: "/etc/pki/tls/certs/ca-bundle.crt"

# Optional, default to 1
# ssl_verifypeer: 1

# Optional, default to None
# Override the default Qserv value
async_proc_limit: 4

# Optional, default to None
# Override the default Qserv value
low_speed_limit: 10

# Optional, default to None
# Override the default Qserv value
low_speed_time: 3600
21 changes: 13 additions & 8 deletions doc/admin/qserv-ingest/run.rst
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Expand Up @@ -56,8 +56,8 @@ For additional informations, check official documentation for `setting the names
- `git-lfs <https://git-lfs.com>`__ is required in order to retrieve integration test datasets.

Prepare Qserv ingest
====================
Prepare and configure Qserv ingest
==================================

Get the project
---------------
Expand All @@ -81,13 +81,18 @@ A directory with ingest workflow configuration and an ``env.sh`` file have to be
cp env.example.sh env.sh
#. In ``env.sh``, set ``OVERLAY`` to ``<CUSTOM_INGEST>``, and eventually ``INSTANCE`` to the name of current Qserv instance.
#. In ingest workflow configuration file (named ``manifests/<CUSTOM_INGEST>/configmap/ingest.yaml``), set:
#. Configure ingest workflow configuration file (named ``manifests/<CUSTOM_INGEST>/configmap/ingest.yaml``):

..
Copy example configuration file in current directory in order to update documentation
cp ~/src/qserv-ingest/manifests/base/configmap/ingest.yaml ~/src/qserv/doc/admin/qserv-ingest/
Inline documentation for this configuration file is avalaible at ``manifests/base/configmap/ingest.yaml``:

.. literalinclude:: ingest.yaml
:language: yaml
:linenos:

#. ``ingest/input/servers`` to the list of http servers providing input dataset, The ingest process will load-balance the download of input files accross these servers.
#. ``ingest/input/path`` to the **path to input data on the http server**
#. ``ingest/qserv/query_url`` to the URL which serve Qserv SQL queries
#. ``ingest/qserv/queue_url`` to the URL which serve input chunk contributions queue
#. ``ingest/qserv/replication_url`` to the URL which serve replication controller service

Launch Qserv ingest
===================
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4 changes: 3 additions & 1 deletion doc/admin/test-set.rst
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Test sets
*********

.. warning::
DEPRECATED

Integration tests
=================

Expand All @@ -28,7 +31,6 @@ Directory structure
^^^^^^^^^^^^^^^^^^^

::

case<number>/
README.txt - contains info about data
queries/
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12 changes: 10 additions & 2 deletions doc/dev/doc.rst
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Generate documentation
######################

Documentation is automatically built and generated on each Github Action build. This can also be performed manually by launching script below:
Documentation is automatically built and generated on each Github Action build. This may also be done locally by manually running the following script:

.. code:: sh
Expand All @@ -11,4 +11,12 @@ Documentation is automatically built and generated on each Github Action build.
qserv build-images --pull-image
# Require '--user=qserv' if uid=1000 on host machine
rm -rf $QSERV_SRC_DIR/build/doc
qserv build-docs --cmake --linkcheck --user=qserv
# Run this only command to regenerate documentation
qserv build-docs --cmake --linkcheck --user=qserv
Documentation can then be accessed locally with a web browser:

.. code:: sh
# Access documentation
firefox $QSERV_SRC_DIR/build/doc/html/index.html

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