biclustering-experiments

Experiments of biclustering algorithms on syntetic data.

The notebook is hosted in http://nbviewer.ipython.org/github/lucasbrunialti/biclustering-experiments/blob/master/BiclusteringTest.ipynb.

Name		Name	Last commit message	Last commit date
Latest commit History 35 Commits
biclustering		biclustering
data		data
experiments		experiments
paper		paper
results/nmfOnIG		results/nmfOnIG
.gitignore		.gitignore
20NewsgroupNMTF.ipynb		20NewsgroupNMTF.ipynb
Analysis.ipynb		Analysis.ipynb
Analysis2.ipynb		Analysis2.ipynb
Analysis3.ipynb		Analysis3.ipynb
Analysis4.ipynb		Analysis4.ipynb
BiclusteringAlgosSolvingSynteticDatasets.ipynb		BiclusteringAlgosSolvingSynteticDatasets.ipynb
BiclusteringTest.ipynb		BiclusteringTest.ipynb
BoxplotResults.ipynb		BoxplotResults.ipynb
ChengChurchTest.ipynb		ChengChurchTest.ipynb
Experiments.ipynb		Experiments.ipynb
Experiments2.ipynb		Experiments2.ipynb
LICENSE		LICENSE
NIPS.ipynb		NIPS.ipynb
NewAlgo.ipynb		NewAlgo.ipynb
NewAlgo2.ipynb		NewAlgo2.ipynb
NewsAnalysis-Copy1.ipynb		NewsAnalysis-Copy1.ipynb
NewsAnalysis.ipynb		NewsAnalysis.ipynb
Preprocessing.ipynb		Preprocessing.ipynb
README.md		README.md
S.csv		S.csv
SyntheticAnalysis.ipynb		SyntheticAnalysis.ipynb
TopNWords (ONMTF\|FNMTF).ipynb		TopNWords (ONMTF\|FNMTF).ipynb
TopWords.ipynb		TopWords.ipynb
U.csv		U.csv
Untitled.ipynb		Untitled.ipynb
V.csv		V.csv
algos		algos
all_words_top.csv		all_words_top.csv
arena_news_df.pkl		arena_news_df.pkl
arena_news_df_plus.pkl		arena_news_df_plus.pkl
arena_news_stem_df.pkl		arena_news_stem_df.pkl
arena_news_stem_df_plus.pkl		arena_news_stem_df_plus.pkl
arena_words_top.csv		arena_words_top.csv
data.h5		data.h5
error.csv		error.csv
fnmtf.ipynb		fnmtf.ipynb
fuzzy_cmeans_news_results.csv		fuzzy_cmeans_news_results.csv
generate_data.py		generate_data.py
hard_stopwords.txt		hard_stopwords.txt
jovem_news_df.pkl		jovem_news_df.pkl
jovem_news_stem_df.pkl		jovem_news_stem_df.pkl
kmeans_news_results.csv		kmeans_news_results.csv
kmeans_results.txt		kmeans_results.txt
nips_data		nips_data
nips_labels		nips_labels
nmf.ipynb		nmf.ipynb
nmfOnIG.ipynb		nmfOnIG.ipynb
nmtf_bin_news_results.csv		nmtf_bin_news_results.csv
nmtf_overlap_bin_2x2_S.csv		nmtf_overlap_bin_2x2_S.csv
nmtf_overlap_bin_2x2_V0_words_doc_clust_0_top.csv		nmtf_overlap_bin_2x2_V0_words_doc_clust_0_top.csv
nmtf_overlap_bin_2x2_V0_words_doc_clust_1_top.csv		nmtf_overlap_bin_2x2_V0_words_doc_clust_1_top.csv
nmtf_overlap_bin_2x2_V1_words_doc_clust_0_top.csv		nmtf_overlap_bin_2x2_V1_words_doc_clust_0_top.csv
nmtf_overlap_bin_2x2_V1_words_doc_clust_1_top.csv		nmtf_overlap_bin_2x2_V1_words_doc_clust_1_top.csv
nmtf_overlap_bin_2x2_doc_cluster_0_words_top.csv		nmtf_overlap_bin_2x2_doc_cluster_0_words_top.csv
nmtf_overlap_bin_2x2_doc_cluster_1_words_top.csv		nmtf_overlap_bin_2x2_doc_cluster_1_words_top.csv
nmtf_overlap_bin_2x3_S.csv		nmtf_overlap_bin_2x3_S.csv
nmtf_overlap_bin_2x3_V0_words_doc_clust_0_top.csv		nmtf_overlap_bin_2x3_V0_words_doc_clust_0_top.csv
nmtf_overlap_bin_2x3_V0_words_doc_clust_1_top.csv		nmtf_overlap_bin_2x3_V0_words_doc_clust_1_top.csv
nmtf_overlap_bin_2x3_V1_words_doc_clust_0_top.csv		nmtf_overlap_bin_2x3_V1_words_doc_clust_0_top.csv
nmtf_overlap_bin_2x3_V1_words_doc_clust_1_top.csv		nmtf_overlap_bin_2x3_V1_words_doc_clust_1_top.csv
nmtf_overlap_bin_2x3_V2_words_doc_clust_0_top.csv		nmtf_overlap_bin_2x3_V2_words_doc_clust_0_top.csv
nmtf_overlap_bin_2x3_V2_words_doc_clust_1_top.csv		nmtf_overlap_bin_2x3_V2_words_doc_clust_1_top.csv
nmtf_overlap_bin_2x3_doc_cluster_0_words_top.csv		nmtf_overlap_bin_2x3_doc_cluster_0_words_top.csv
nmtf_overlap_bin_2x3_doc_cluster_1_words_top.csv		nmtf_overlap_bin_2x3_doc_cluster_1_words_top.csv
nmtf_overlap_bin_3x2_S.csv		nmtf_overlap_bin_3x2_S.csv
nmtf_overlap_bin_3x2_V0_words_doc_clust_0_top.csv		nmtf_overlap_bin_3x2_V0_words_doc_clust_0_top.csv
nmtf_overlap_bin_3x2_V0_words_doc_clust_1_top.csv		nmtf_overlap_bin_3x2_V0_words_doc_clust_1_top.csv
nmtf_overlap_bin_3x2_V0_words_doc_clust_2_top.csv		nmtf_overlap_bin_3x2_V0_words_doc_clust_2_top.csv
nmtf_overlap_bin_3x2_V1_words_doc_clust_0_top.csv		nmtf_overlap_bin_3x2_V1_words_doc_clust_0_top.csv
nmtf_overlap_bin_3x2_V1_words_doc_clust_1_top.csv		nmtf_overlap_bin_3x2_V1_words_doc_clust_1_top.csv
nmtf_overlap_bin_3x2_V1_words_doc_clust_2_top.csv		nmtf_overlap_bin_3x2_V1_words_doc_clust_2_top.csv
nmtf_overlap_bin_3x2_doc_cluster_0_words_top.csv		nmtf_overlap_bin_3x2_doc_cluster_0_words_top.csv
nmtf_overlap_bin_3x2_doc_cluster_1_words_top.csv		nmtf_overlap_bin_3x2_doc_cluster_1_words_top.csv
nmtf_overlap_bin_3x2_doc_cluster_2_words_top.csv		nmtf_overlap_bin_3x2_doc_cluster_2_words_top.csv
nmtf_overlap_bin_3x3_S.csv		nmtf_overlap_bin_3x3_S.csv
nmtf_overlap_bin_3x3_V0_words_doc_clust_0_top.csv		nmtf_overlap_bin_3x3_V0_words_doc_clust_0_top.csv
nmtf_overlap_bin_3x3_V0_words_doc_clust_1_top.csv		nmtf_overlap_bin_3x3_V0_words_doc_clust_1_top.csv
nmtf_overlap_bin_3x3_V0_words_doc_clust_2_top.csv		nmtf_overlap_bin_3x3_V0_words_doc_clust_2_top.csv
nmtf_overlap_bin_3x3_V1_words_doc_clust_0_top.csv		nmtf_overlap_bin_3x3_V1_words_doc_clust_0_top.csv
nmtf_overlap_bin_3x3_V1_words_doc_clust_1_top.csv		nmtf_overlap_bin_3x3_V1_words_doc_clust_1_top.csv
nmtf_overlap_bin_3x3_V1_words_doc_clust_2_top.csv		nmtf_overlap_bin_3x3_V1_words_doc_clust_2_top.csv
nmtf_overlap_bin_3x3_V2_words_doc_clust_0_top.csv		nmtf_overlap_bin_3x3_V2_words_doc_clust_0_top.csv
nmtf_overlap_bin_3x3_V2_words_doc_clust_1_top.csv		nmtf_overlap_bin_3x3_V2_words_doc_clust_1_top.csv
nmtf_overlap_bin_3x3_V2_words_doc_clust_2_top.csv		nmtf_overlap_bin_3x3_V2_words_doc_clust_2_top.csv
nmtf_overlap_bin_3x3_doc_cluster_0_words_top.csv		nmtf_overlap_bin_3x3_doc_cluster_0_words_top.csv
nmtf_overlap_bin_3x3_doc_cluster_1_words_top.csv		nmtf_overlap_bin_3x3_doc_cluster_1_words_top.csv
nmtf_overlap_bin_3x3_doc_cluster_2_words_top.csv		nmtf_overlap_bin_3x3_doc_cluster_2_words_top.csv
onmtf_2x2_S.csv		onmtf_2x2_S.csv
onmtf_2x2_V0_words_top.csv		onmtf_2x2_V0_words_top.csv
onmtf_2x2_V1_words_top.csv		onmtf_2x2_V1_words_top.csv
onmtf_2x2_doc_cluster_0_words_top.csv		onmtf_2x2_doc_cluster_0_words_top.csv
onmtf_2x2_doc_cluster_1_words_top.csv		onmtf_2x2_doc_cluster_1_words_top.csv
onmtf_2x2_doc_cluster_2_words_top.csv		onmtf_2x2_doc_cluster_2_words_top.csv
onmtf_2x3_S.csv		onmtf_2x3_S.csv

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