covid19viz

New visualization and prediction of COVID-19 in USA, such as Michigan, CA, OH, NY, TX, showing here at www.cloudh.org/datapublic.

I. Visualize the data of COVID-19 today

II. View the history data of COVID-19

III. Predict the future of COVID-19

Steps

1. Grab data from goverment websites
2. Save to excel file for store
3. Show data in new diagram

How to run in Windows

1. Download and install python at https://www.python.org/downloads/ to c:/python3

2. Add path c:/python3 to system path of Windows

3. To install pip, download get-pip.py by following this link: https://bootstrap.pypa.io/get-pip.py. Save to c:/python3

4. Go to c:/python3, run python get-pip.py

5. Add path c:/python3/scripts to system path of Windows

6. Run cmd.exe to enter command window, install libraries by

   pip3 install opencv-python

   pip3 install pandas

   pip3 install matplotlib

   pip3 install lxml

   pip3 install scipy

7. Run python3 coviz.py

8. Optionally install base map

   download and install

      http://download.osgeo.org/osgeo4w/osgeo4w-setup-x86_64.exe
   
      https://download.microsoft.com/download/7/9/6/796EF2E4-801B-4FC4-AB28-B59FBF6D907B/VCForPython27.msi
   

   pip3 install pyproj==1.9.6

   set the system environment variable:

                                    GEOS_DIR=C:\OSGeo4W64
   
                                    PROJ_DIR=C:\OSGeo4W64
   

   add C:\OSGeo4W64\bin to PATH

   pip3 install --user git+https://github.com/matplotlib/basemap.git or

   pip3 install basemap‑1.2.1‑cp27‑cp27m‑win_amd64.whl (downloaded from https://www.lfd.uci.edu/~gohlke/pythonlibs/)

9. install chrome driver

   https://selenium-python.readthedocs.io/installation.html

   In linux: download file at https://sites.google.com/chromium.org/driver/downloads?authuser=0

    sudo cp  ~/Downloads/chromedriver /usr/local/bin/
   

10. another way to install basemap on ubantu, run these coads in ubantu:

    sudo apt-get install libgeos-3.X.X

    sudo apt-get install libgeos-dev

    pip3 install --user https://github.com/matplotlib/basemap/archive/master.zip

How to run in Ubuntu

1. Run python3 coviz.py

Funcational keys in main window

SIR model

1. Predict with SIR model / SIRmodel, referring to Wuhan data

pytesseract

1. to be rooted on ubantu, if you have a password, run 'su'. if there is no password, run 'sudo -i'
2. when using pythn 2, to download pytesseract, you need to run this coad in the terminal: sudo pip3 install pytesseract==0.3.0

Add you SSH key to the setting of your github

1. Before commit your codes, please add SSH key
2. Use git push with Token: How to get token? Refer to https://ginnyfahs.medium.com/github-error-authentication-failed-from-command-line-3a545bfd0ca8