Update github action to test all callers

marine-omics · Sep 13, 2024 · 1d178cb · 1d178cb
1 parent ba8eaab
commit 1d178cb
Showing 1 changed file with 2 additions and 10 deletions.
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -21,16 +21,8 @@ jobs:
         sudo mv nextflow /usr/local/bin/
     - name: Run movp test
       run: |
-        nextflow run marine-omics/movp -profile docker,test -r main --callers gatk
-    - name: Whereami
+        nextflow run marine-omics/movp -profile docker,test -r main
+    - name: Show Log
       if: always()
       run: |
-        pwd
-        ls -a 
         cat .nextflow.log
-    - name: Archive nextflow log
-      if: always()
-      uses: actions/upload-artifact@v4
-      with:
-        name: Nextflow logs
-        path: /home/runner/work/movp/movp/.nextflow.log