Add util and test data

marine-omics · Apr 22, 2024 · 379c63a · 379c63a
1 parent 0171440
commit 379c63a
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diff --git a/modules/util.nf b/modules/util.nf
@@ -0,0 +1,14 @@
+
+process name_by_sample {
+
+    input:
+    tuple val(sample), path(bam)
+
+    output:
+    tuple val(sample), path ("${sample}.bam"), emit: merged_bam
+
+    script:
+    """
+    cp "${bam}" "${sample}.bam"
+    """
+}
diff --git a/test/data/DI-1-1_1.R1.fq.gz b/test/data/DI-1-1_1.R1.fq.gz
diff --git a/test/data/DI-1-1_1.R2.fq.gz b/test/data/DI-1-1_1.R2.fq.gz
diff --git a/test/data/DI-1-1_2.R1.fq.gz b/test/data/DI-1-1_2.R1.fq.gz
diff --git a/test/data/DI-1-1_2.R2.fq.gz b/test/data/DI-1-1_2.R2.fq.gz