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Remove superseded actions and behaviours.
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Now all spot addition and link toggling in BDV views are done with
the new add or link action.
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@tinevez
tinevez committed Nov 10, 2024
1 parent 1f310d2 commit 51d2356
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Showing 5 changed files with 4 additions and 432 deletions.
2 changes: 1 addition & 1 deletion src/main/java/org/mastodon/mamut/views/bdv/MamutViewBdv.java
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Original file line number Diff line number Diff line change
Expand Up @@ -222,7 +222,7 @@ public MamutViewBdv( final ProjectModel appModel )

BdvSelectionBehaviours.install( viewBehaviours, viewGraph, tracksOverlay, selectionModel, focusModel,
navigationHandler );
EditBehaviours.install( viewBehaviours, viewer, viewGraph, tracksOverlay, selectionModel, focusModel, model,
EditBehaviours.install( viewBehaviours, viewer, viewGraph, tracksOverlay, focusModel, model,
getMinRadius( sharedBdvData ) );
EditSpecialBehaviours.install( viewBehaviours, frame.getViewerPanel(), viewGraph, tracksOverlay, selectionModel,
focusModel, model );
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98 changes: 1 addition & 97 deletions src/main/java/org/mastodon/views/bdv/overlay/EditBehaviours.java
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Original file line number Diff line number Diff line change
Expand Up @@ -30,9 +30,7 @@

import java.util.concurrent.locks.ReentrantReadWriteLock;

import org.mastodon.collection.RefSet;
import org.mastodon.model.FocusModel;
import org.mastodon.model.SelectionModel;
import org.mastodon.ui.keymap.KeyConfigContexts;
import org.mastodon.ui.keymap.KeyConfigScopes;
import org.mastodon.undo.UndoPointMarker;
Expand Down Expand Up @@ -160,8 +158,6 @@ public void getCommandDescriptions( final CommandDescriptions descriptions )
*/
private static final double ALOT_RADIUS_CHANGE = 1.;

private final AddSpotBehaviour addSpotBehaviour;

private final ToggleAutoLinkingModeBehaviour toggleAutoLinkingModeBehaviour;

private final MoveSpotBehaviour moveSpotBehaviour;
Expand All @@ -183,16 +179,14 @@ public static < V extends OverlayVertex< V, E >, E extends OverlayEdge< E, V > >
final ViewerPanel viewerPanel,
final OverlayGraph< V, E > overlayGraph,
final OverlayGraphRenderer< V, E > renderer,
final SelectionModel< V, E > selection,
final FocusModel< V > focus,
final UndoPointMarker undo,
final double minRadius )
{
final EditBehaviours< V, E > eb = new EditBehaviours<>( viewerPanel, overlayGraph, renderer, selection, focus,
final EditBehaviours< V, E > eb = new EditBehaviours<>( viewerPanel, overlayGraph, renderer, focus,
undo, NORMAL_RADIUS_CHANGE, ABIT_RADIUS_CHANGE, ALOT_RADIUS_CHANGE, minRadius );

behaviours.namedBehaviour( eb.moveSpotBehaviour, MOVE_SPOT_KEYS );
behaviours.namedBehaviour( eb.addSpotBehaviour, ADD_SPOT_KEYS );
behaviours.namedBehaviour( eb.toggleAutoLinkingModeBehaviour, TOGGLE_AUTO_LINKING_MODE_KEYS );
behaviours.namedBehaviour( eb.increaseSpotRadiusBehaviour, INCREASE_SPOT_RADIUS_KEYS );
behaviours.namedBehaviour( eb.increaseSpotRadiusBehaviourABit, INCREASE_SPOT_RADIUS_ABIT_KEYS );
Expand All @@ -208,8 +202,6 @@ public static < V extends OverlayVertex< V, E >, E extends OverlayEdge< E, V > >

private final OverlayGraphRenderer< V, E > renderer;

private final SelectionModel< V, E > selection;

private final FocusModel< V > focus;

private final UndoPointMarker undo;
Expand All @@ -220,7 +212,6 @@ private EditBehaviours(
final ViewerPanel viewerPanel,
final OverlayGraph< V, E > overlayGraph,
final OverlayGraphRenderer< V, E > renderer,
final SelectionModel< V, E > selection,
final FocusModel< V > focus,
final UndoPointMarker undo,
final double normalRadiusChange,
Expand All @@ -232,12 +223,10 @@ private EditBehaviours(
this.overlayGraph = overlayGraph;
this.lock = overlayGraph.getLock();
this.renderer = renderer;
this.selection = selection;
this.focus = focus;
this.undo = undo;

moveSpotBehaviour = new MoveSpotBehaviour( MOVE_SPOT );
addSpotBehaviour = new AddSpotBehaviour( ADD_SPOT );
toggleAutoLinkingModeBehaviour = new ToggleAutoLinkingModeBehaviour( TOGGLE_AUTO_LINKING_MODE );
increaseSpotRadiusBehaviour = new ResizeSpotBehaviour( INCREASE_SPOT_RADIUS, normalRadiusChange, minRadius );
increaseSpotRadiusBehaviourALot =
Expand Down Expand Up @@ -268,91 +257,6 @@ public void click( final int x, final int y )
}
}

private class AddSpotBehaviour extends AbstractNamedBehaviour implements ClickBehaviour
{

private final double[] pos;

public AddSpotBehaviour( final String name )
{
super( name );
pos = new double[ 3 ];
}

@Override
public void click( final int x, final int y )
{
boolean isOutsideExistingSpot = false;
lock.readLock().lock();
try
{
final V ref = overlayGraph.vertexRef();
isOutsideExistingSpot = renderer.getVertexAt( x, y, POINT_SELECT_DISTANCE_TOLERANCE, ref ) == null;
overlayGraph.releaseRef( ref );
}
finally
{
lock.readLock().unlock();
}

// Only create a spot if we don't click inside an existing spot.
if ( isOutsideExistingSpot )
{
final int timepoint = renderer.getCurrentTimepoint();
renderer.getGlobalPosition( x, y, pos );
final V ref = overlayGraph.vertexRef();
lock.writeLock().lock();
try
{
final V vertex = overlayGraph.addVertex( ref ).init( timepoint, pos, lastRadius );

if ( autoLink )
{
final RefSet< V > selectedVertices = selection.getSelectedVertices();
if ( selectedVertices.size() == 1 )
{
final V previous = selectedVertices.iterator().next();
/*
* Careful with directed graphs. We always check and
* create links forward in time.
*/
final int t1 = vertex.getTimepoint();
final int t2 = previous.getTimepoint();
if ( t1 != t2 )
{
final V from = t1 > t2 ? previous : vertex;
final V to = t1 > t2 ? vertex : previous;
final E eref = overlayGraph.edgeRef();
overlayGraph.addEdge( from, to, eref ).init();
overlayGraph.releaseRef( eref );
}
}
}

overlayGraph.notifyGraphChanged();

undo.setUndoPoint();

if ( FOCUS_EDITED_SPOT )
focus.focusVertex( vertex );

if ( SELECT_ADDED_SPOT )
{
selection.pauseListeners();
selection.clearSelection();
selection.setSelected( vertex, true );
selection.resumeListeners();
}
}
finally
{
overlayGraph.releaseRef( ref );
lock.writeLock().unlock();
}
}
}
}

private class MoveSpotBehaviour extends AbstractNamedBehaviour implements DragBehaviour
{

Expand Down
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