Update SummaryStats.R #43
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Correct getMarkovMatrix function to calculate true transition matrix.
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I think @catsutherland is correct here - to make sense this function needs to sum rows and not columns. Are you able to confirm, since this would seem to make comparisons of junctional insertions incorrect? |
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Update getMarkovMatrix function to calculate true transition matrix - divide by rowSums so probabilities across each row sum to 1.