This repository holds the code for our paper The OOD Detection Blindspot of Unsupervised Lesion Detection which has been accepted for the MIDL (Medical Imaging with Deep Learning) 2021 conference. This project has been carried out in the the scope of a Masters Thesis at the Computer Vision Lab at ETHZ.
Pleaser refer to the MIDL 2021 publication The OOD Detection Blindspot of Unsupervised Lesion Detection.
This is an example of how you may give instructions on setting up your project locally. To get a local copy up and running follow these simple example steps.
- pyenv - to manage your local python versions
- pipenv - manage python dependencies within a virtual environment
- cuda - well, the NVIDIA stuff
- cuDNN - more NVIDIA stuff, deep learning on steroids
- Clone the repo
git clone https://github.com/matthaeusheer/uncertify.git- Install python dependencies via
pipenv
cd uncertify
pipenv install- Active virtual environment
pipenv shellPlease check out the python scripts in the scripts folder and jupyter notebooks in the notebooks folder.
Distributed under the MIT License. See LICENSE for more information.
Matthäus Heer, Physics Institute, University of Zurich Janis Postels, Computer Vision Lab, ETH Zurich Xiaoran Chen, Computer Vision Lab, ETH Zurich Shadi Albarqouni, Helmholtz AI, Helmholtz Zentrum M ̈unchen,