add main.nf.test.snap and update main.nf.test as per pull request nf-…

…core#6636
maxlcummins · Sep 16, 2024 · 5fd2db1 · 5fd2db1
1 parent 388a1b2
commit 5fd2db1
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Showing 2 changed files with 35 additions and 17 deletions.
diff --git a/modules/nf-core/shigapass/tests/main.nf.test b/modules/nf-core/shigapass/tests/main.nf.test
@@ -10,9 +10,6 @@ nextflow_process {
     test("candidatus_portiera_aleyrodidarum - genome.fasta") {
 
         when {
-            params {
-                outdir = "$outputDir"
-            }
             process {
                 """
                 input[0] = [
@@ -36,9 +33,6 @@ nextflow_process {
         options "-stub"
 
         when {
-            params {
-                outdir = "$outputDir"
-            }
             process {
                 """
                 input[0] = [
@@ -58,4 +52,4 @@ nextflow_process {
 
     }
 
-}
+}
diff --git a/modules/nf-core/shigapass/tests/main.nf.test.snap b/modules/nf-core/shigapass/tests/main.nf.test.snap
@@ -3,46 +3,70 @@
         "content": [
             {
                 "0": [
-
+                    [
+                        {
+                            "id": "test",
+                            "single_end": false
+                        },
+                        "test.csv:md5,d41d8cd98f00b204e9800998ecf8427e"
+                    ]
                 ],
                 "1": [
-
+                    "versions.yml:md5,cbfa0021091852d8fa9a1ce14f95b669"
                 ],
                 "report": [
-
+                    [
+                        {
+                            "id": "test",
+                            "single_end": false
+                        },
+                        "test.csv:md5,d41d8cd98f00b204e9800998ecf8427e"
+                    ]
                 ],
                 "versions": [
-
+                    "versions.yml:md5,cbfa0021091852d8fa9a1ce14f95b669"
                 ]
             }
         ],
         "meta": {
             "nf-test": "0.9.0",
             "nextflow": "24.04.4"
         },
-        "timestamp": "2024-09-13T11:41:51.692438"
+        "timestamp": "2024-09-16T12:00:38.954924"
     },
     "candidatus_portiera_aleyrodidarum - genome.fasta": {
         "content": [
             {
                 "0": [
-
+                    [
+                        {
+                            "id": "test",
+                            "single_end": false
+                        },
+                        "test.csv:md5,7bfae0e8ac3429194b3c1c2addd2e1ea"
+                    ]
                 ],
                 "1": [
-
+                    "versions.yml:md5,cbfa0021091852d8fa9a1ce14f95b669"
                 ],
                 "report": [
-
+                    [
+                        {
+                            "id": "test",
+                            "single_end": false
+                        },
+                        "test.csv:md5,7bfae0e8ac3429194b3c1c2addd2e1ea"
+                    ]
                 ],
                 "versions": [
-
+                    "versions.yml:md5,cbfa0021091852d8fa9a1ce14f95b669"
                 ]
             }
         ],
         "meta": {
             "nf-test": "0.9.0",
             "nextflow": "24.04.4"
         },
-        "timestamp": "2024-09-13T11:41:48.121725"
+        "timestamp": "2024-09-16T12:00:24.613691"
     }
 }